WERAM Information

Tag Content
WERAM ID WERAM-Brr-0117
Ensembl Protein ID Bra022578.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra022578 Bra022578.1 Bra022578.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 0.00011 23.3 11 124
Organism Brassica rapa
Domain Profile
  Me_Reader Tudor
      Tudor.txt  5 GlrVvakwssdG...yfYsgkiVvkghrvesgeeyysikyedqrkwyi 49
                   G+ V+++  + G   ++++ kiV     +  + +yys ky d++k +i
  Bra022578.1-P 11 GQTVEVRSFEHGyrgAWFRCKIV--RIYIVEETLYYSLKYLDYEKEEI 56
                   666666655566666*******6..44556899999*******99764 PP
      Tudor.txt   2 skvGlrVvakwssdGyfYsgkiVvkghr 29 
                    +kvG+ V+  w +d +++sg++V+ ++ 
  Bra022578.1-P  99 WKVGDLVD--WHKDDCYWSGTVVALKKN 124
                    89999987..9999********976665 PP
Protein Sequence
(Fasta)		MSQTNLPFKD GQTVEVRSFE HGYRGAWFRC KIVRIYIVEE TLYYSLKYLD YEKEEIHEQQ 60
VFQRFEDEEK EWIMVRPSYP SVRKIEADQK PLDVARGSWK VGDLVDWHKD DCYWSGTVVA 120
LKKNEPLQVE LYPPPRGEGA TYNALRKDLR PSLEWSLEDG WTLPSADGRQ GNVIGS 176
Nucleotide Sequence
(Fasta)		ATGTCTCAAA CCAACCTACC TTTCAAAGAT GGTCAAACTG TTGAAGTAAG ATCCTTTGAA 60
CATGGATATC GCGGAGCTTG GTTTCGTTGC AAGATAGTAA GGATATACAT AGTGGAGGAG 120
ACATTGTACT ACAGCTTGAA GTATCTTGAT TACGAAAAAG AAGAGATACA TGAGCAACAA 180
GTCTTTCAGC GGTTTGAAGA TGAGGAGAAA GAGTGGATAA TGGTTCGACC CTCGTACCCA 240
TCAGTCCGTA AAATTGAGGC TGACCAAAAA CCTCTTGACG TCGCTCGTGG CTCTTGGAAA 300
GTAGGAGACT TAGTTGATTG GCATAAAGAT GATTGTTACT GGTCTGGAAC GGTTGTGGCA 360
TTGAAGAAGA ACGAACCATT ACAGGTTGAA CTGTATCCTC CACCACGTGG TGAAGGAGCG 420
ACTTACAACG CTTTGAGAAA GGACTTACGT CCATCATTGG AATGGTCACT TGAAGATGGC 480
TGGACATTGC CTTCTGCGGA CGGAAGACAA GGCAATGTGA TCGGCTCGTG A 532
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0031 Bo2g048060.1 Brassica oleracea 66 6e-62 233
WERAM-Thc-0055 EOY05946 Theobroma cacao 46 2e-37 152
WERAM-Zem-0118 GRMZM2G343445_P03 Zea mays 44 1e-34 142
WERAM-Brd-0050 BRADI2G36700.1 Brachypodium distachyon 40 4e-32 134
WERAM-Tra-0116 Traes_3B_946313BB9.1 Triticum aestivum 37 3e-27 118
WERAM-Hov-0066 MLOC_57618.1 Hordeum vulgare 37 5e-27 117
WERAM-Orl-0012 KN538696.1_FGP117 Oryza longistaminata 37 1e-24 109
WERAM-Tru-0002 TRIUR3_01744-P1 Triticum urartu 37 3e-23 105
WERAM-Php-0098 PP1S43_153V6.1 Physcomitrella patens 34 3e-22 101
Created Date 25-Jun-2016