WERAM Information

Tag Content
WERAM ID WERAM-Brr-0105
Ensembl Protein ID Bra020249.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra020249 Bra020249.1 Bra020249.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.30e-07 32.7 114 397
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslp.eg.....kswyCpsCk 51 
                     C+ Cg + e e+ m+qCd   C+ w H+ Cv +p  + p +g     +s+yC+ C+
  Bra020249.1-P 114 RCV-CGSSLETES-MIQCDDprCHVWQHVGCVIVP--EKPmDGnpplpESFYCEVCR 166
                    698.*77777766.*********************..5552335799889******8 PP
        PHD.txt   3 iClvCgkd 10 
                     C++C k+
  Bra020249.1-P 390 QCPICLKN 397
                    35555444 PP
Protein Sequence
(Fasta)		MDLEARCKDK LLHFRIKELK DVLTQLGLSK QGKKQELVER ILTVLSDGKS ARLWSKRNTV 60
AKEEVARLVD DTYRKIKVSG ASDLASKAQV SSDTSNLKVK GEPEASFRPE MKVRCVCGSS 120
LETESMIQCD DPRCHVWQHV GCVIVPEKPM DGNPPLPESF YCEVCRLTRA DPFWVTVAHP 180
LYPVRLTATN IPTDGSSAMQ SAERTFQITR ADKDLLAKQE YDVQAWCMLL NDKVLFRMQW 240
PQHADLQING MPVRAIYRPG SQLLGANGRD DGPIITPFVR DGINRISLSG GDSRSFCFGV 300
RLVKRRTLQQ VLNLIPEETK GETFEDALAR VRRCIGGGGG DDNADSDSDI EVVADFFGVN 360
LRCPMSGSRI KVAGRFLPCV HMGGFDLEWQ CPICLKNYSV EHVIVDPYFN RITSKMMHCD 420
EEVTEIEVKP DGSWRVKSKK ESERRELGEL TQWHAPDGTL CPSGDEIKRK METMIPVKQE 480
GFSDGGGPTS LKLGIRKNRN GVWEVSKPNN ANGMSSSNRQ EKNIIPMSSS ATGSGRDGDD 540
TSVNQGAAIG TTFDFGTNGV DLDSVSMNVD SGYNQAGEDR NNEVIVLSDS DEDNDLVITP 600
GPAYSDSRTN GGVNFPLNPS GIINSYNEEP HTLAGGSSRL GLFNDDDEFD TRLWSFPSET 660
PEASGFQLFA SDADVDLHHQ GSLNCGPEIN GDYTMAPETT SMASIPPPVV PDGRAEAVAN 720
DGLVDNPLAF GRDDPSLQIF LPTKPDGSAQ SGFRNQGDVS NGIRSDDWIS LRLGDSACED 780
HGEPANAREG SLDDTTENDS LLLGMNESRQ DKAKKRRSDN PFSFPRQKRS VRPRMFLSID 840
SDSDE 845
Nucleotide Sequence
(Fasta)		ATGGACTTGG AAGCTCGTTG TAAGGATAAG CTTTTACATT TTAGGATAAA AGAGCTCAAG 60
GATGTGCTCA CTCAGCTCGG ACTTTCGAAA CAGGGAAAGA AGCAGGAACT TGTCGAGCGG 120
ATCTTGACCG TTCTTTCTGA TGGAAAATCT GCAAGGTTGT GGTCTAAAAG GAATACAGTG 180
GCGAAGGAAG AAGTTGCAAG ACTGGTGGAT GATACTTATA GGAAAATCAA AGTATCTGGA 240
GCAAGTGATT TGGCATCAAA AGCACAAGTA AGCTCAGATA CGAGTAATCT GAAAGTCAAG 300
GGGGAGCCTG AAGCTTCCTT TCGACCAGAG ATGAAAGTTC GGTGTGTCTG TGGAAGTTCA 360
CTGGAGACGG AGTCAATGAT TCAGTGTGAT GATCCAAGAT GCCATGTTTG GCAGCATGTT 420
GGGTGTGTTA TTGTCCCGGA AAAGCCGATG GATGGAAATC CACCACTTCC TGAATCATTT 480
TATTGTGAAG TCTGCCGACT CACTCGAGCT GACCCGTTTT GGGTTACAGT GGCACATCCA 540
CTTTATCCAG TGAGGTTGAC TGCAACGAAC ATCCCAACTG ATGGTTCAAG CGCAATGCAG 600
AGTGCTGAGA GAACATTTCA AATCACAAGG GCAGACAAGG ACTTATTGGC CAAACAAGAG 660
TACGATGTTC AGGCTTGGTG TATGCTATTG AATGACAAAG TTCTCTTTAG GATGCAATGG 720
CCTCAGCATG CTGATCTGCA GATCAATGGT ATGCCTGTAC GTGCAATTTA CCGACCTGGG 780
TCACAGCTTT TGGGGGCCAA CGGCCGCGAC GATGGACCTA TTATCACACC TTTTGTTAGG 840
GATGGAATCA ACAGAATATC CTTGAGTGGA GGTGACAGTC GAAGCTTTTG TTTTGGTGTT 900
AGACTTGTGA AGCGCAGGAC TCTACAACAG GTTCTTAATT TGATTCCAGA AGAGACCAAA 960
GGGGAGACGT TTGAAGATGC GCTTGCACGT GTTCGGCGAT GCATTGGAGG TGGAGGTGGA 1020
GATGATAATG CCGACAGTGA TAGTGACATT GAAGTTGTTG CTGACTTCTT CGGTGTCAAT 1080
CTCCGTTGTC CTATGAGCGG TTCTAGGATA AAAGTTGCTG GGAGATTCTT ACCCTGTGTG 1140
CACATGGGAG GTTTTGACCT TGAGTGGCAG TGCCCTATCT GTCTGAAGAA CTACTCAGTG 1200
GAGCATGTAA TCGTGGATCC TTACTTCAAC CGCATCACGT CAAAGATGAT GCATTGTGAT 1260
GAAGAGGTGA CTGAAATCGA AGTGAAACCT GACGGCTCTT GGCGCGTCAA ATCTAAAAAA 1320
GAGAGTGAGC GTAGGGAACT AGGGGAACTC ACGCAGTGGC ACGCACCCGA TGGCACTCTT 1380
TGCCCCTCTG GCGACGAGAT TAAACGGAAG ATGGAAACGA TGATCCCTGT TAAACAAGAA 1440
GGCTTCTCAG ATGGTGGTGG ACCAACCTCT CTGAAACTCG GCATAAGGAA GAACCGCAAC 1500
GGCGTTTGGG AAGTTAGCAA GCCTAATAAT GCAAATGGAA TGTCTTCCAG TAACAGGCAA 1560
GAGAAGAATA TTATACCGAT GAGTAGCAGC GCTACTGGAA GTGGTAGGGA TGGTGATGAC 1620
ACAAGCGTCA ACCAGGGCGC TGCTATTGGA ACAACCTTTG ACTTCGGAAC CAACGGCGTT 1680
GATCTCGATT CCGTTTCCAT GAATGTAGAT TCAGGTTATA ACCAAGCTGG AGAGGATAGG 1740
AATAATGAAG TTATTGTTCT GAGTGATTCC GATGAAGATA ATGATTTGGT CATCACTCCT 1800
GGACCTGCGT ACAGTGATTC AAGAACCAAC GGTGGGGTGA ATTTTCCGTT GAACCCTTCT 1860
GGAATCATCA ACTCTTATAA CGAAGAGCCA CACACCTTAG CTGGGGGAAG CTCGCGGTTA 1920
GGTCTTTTCA ATGATGATGA TGAGTTTGAT ACGCGCCTTT GGTCGTTTCC TTCTGAGACT 1980
CCAGAAGCCT CTGGGTTCCA GCTTTTTGCA TCTGATGCTG ACGTTGATTT GCATCATCAA 2040
GGTTCACTGA ACTGTGGTCC TGAGATAAAT GGAGACTACA CCATGGCTCC TGAGACAACA 2100
TCAATGGCGT CTATTCCTCC TCCAGTAGTT CCAGATGGAA GAGCTGAAGC CGTTGCGAAT 2160
GATGGCTTAG TTGACAATCC TCTTGCGTTT GGTAGAGACG ACCCCTCGCT TCAGATCTTT 2220
TTGCCGACGA AACCGGATGG TTCAGCTCAG TCTGGTTTTC GGAACCAAGG TGATGTGTCG 2280
AATGGTATCA GGAGTGATGA CTGGATCTCG CTTAGGCTAG GTGATAGTGC TTGTGAGGAT 2340
CACGGAGAGC CTGCTAATGC AAGGGAAGGT TCTTTGGATG ATACGACAGA GAATGATTCG 2400
TTGCTGCTGG GTATGAATGA GAGTAGACAA GACAAGGCAA AGAAGAGAAG ATCAGATAAT 2460
CCATTTTCAT TTCCTCGACA GAAGCGTTCT GTAAGACCTC GGATGTTCCT CTCCATTGAC 2520
TCGGATTCTG ATGAGTGA 2539
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 81 0.0 1399
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 81 0.0 1390
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 61 0.0 1014
WERAM-Glm-0141 GLYMA12G07590.1 Glycine max 60 0.0 992
WERAM-Sol-0139 Solyc11g069160.1.1 Solanum lycopersicum 59 0.0 983
WERAM-Met-0101 AES88651 Medicago truncatula 57 0.0 977
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 49 0.0 771
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 48 0.0 766
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 48 0.0 750
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 48 0.0 749
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 48 0.0 747
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 48 0.0 741
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 49 0.0 738
WERAM-Tru-0081 TRIUR3_29937-P1 Triticum urartu 50 7e-174 608
WERAM-Tra-0188 Traes_5BL_09F92E35C.1 Triticum aestivum 48 4e-171 599
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 47 6e-165 578
WERAM-Aet-0041 EMT28925 Aegilops tauschii 47 1e-161 568
WERAM-Sem-0107 EFJ20543 Selaginella moellendorffii 38 7e-137 485
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 39 2e-135 480
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 44 9e-114 408
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 56 6e-107 386
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 41 1e-79 295
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 53 3e-26 118
WERAM-Scp-0049 SPCC645.13.1:pep Schizosaccharomyces pombe 44 5e-07 54.3
WERAM-Amt-0017 ERM95079 Amborella trichopoda 27 2e-06 52.4
Created Date 25-Jun-2016