WERAM Information

Tag Content
WERAM ID WERAM-Brr-0086
Ensembl Protein ID Bra016801.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra016801 Bra016801.1 Bra016801.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 9.20e-73 245.3 583 808
Organism Brassica rapa
Domain Profile
  HDM JHDM2
      JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellks..ieeeel 85 
                    r g lN+a+klp+ +++pdlgPk+y AyG a e +r++++t+lh+d+sdavnil++             ++ lk k++++d kel+ +  ++++e+
  Bra016801.1-P 583 RSGVLNIATKLPEGVLKPDLGPKTYIAYGNADELGRGDSVTKLHCDMSDAVNILMHtaevtlskeqlsaIEALKLKHKQQDEKELQDQndLDRGEI 678
                    7899********************************************************************************986522778899 PP
      JHDM2.txt  86 devtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipaga 177
                      v  ++    +e+ +alW+if+++d++k++e+l+k++ke+++    +v ++++pihdq+++l+ +++++L+ e+G+e+wt+vQk g+av+ipag+
  Bra016801.1-P 679 VAVNDENEFHHDETGSALWDIFRREDVPKLEEYLRKHCKEFRHtycsPVTKVYHPIHDQTLFLTVEHKRKLKAEFGIEPWTFVQKVGEAVFIPAGC 774
                    99999888888888*****************************999889999******************************************** PP
      JHDM2.txt 178 pHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                    pHqv+nlksc kva dFvsPEn++ec+rlt+e+r
  Bra016801.1-P 775 PHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFR 808
                    ********************************98 PP
Protein Sequence
(Fasta)		MEAVVTDNGV NLKHSGLMET KPEKDKPVKP TSLSSGSDIE EEEEEERSVG SLKRVSNKKR 60
KRSIADEGRV AKTKSSREKR AANRRKEKIN GGEKKLKQRS SVRRRAKTKK EDKEREQELS 120
LVPFIEPTDA GNSSESDSHV KNDNFNDCRS MTRSLRAALG ELAICHQCFK GERRFLFICT 180
FCEEKLYCFP CIKKWYPHLS HDDVIEKCPF CRGTCNCDVC LQSSGLIETS KRKLGDNERF 240
HHLQYLIGSM LPFLKKLCKA QEEEIETEAK IQGLMTSQVD VSETLCSNEE RVFCNHCATS 300
IVDLHRSCPK CSYELCLSCC QEIRGGLFSE RPELKLNFVY RGSRYIHGED AEPSSSSVLD 360
DEANDDKPSV NWTANDNGRI TCASKDLGGC GECVLELKRI LPLTRMSDLE KKAERFLASC 420
SVKSLTVSNC RCDSDFEMST MRKAASRNSS NDNNLYSPDS FDVLKEEELL HFQDHWRKGE 480
PVIVRNALNN TAGLSWEPKV MWRALCENVD SAMCIDSLAN CEVKIKTRDF FEGYSKGRSY 540
GNLWPEMLKL KDWPPSDKFD NLLPRHCDEF VSALPFQEYS DPRSGVLNIA TKLPEGVLKP 600
DLGPKTYIAY GNADELGRGD SVTKLHCDMS DAVNILMHTA EVTLSKEQLS AIEALKLKHK 660
QQDEKELQDQ NDLDRGEIVA VNDENEFHHD ETGSALWDIF RREDVPKLEE YLRKHCKEFR 720
HTYCSPVTKV YHPIHDQTLF LTVEHKRKLK AEFGIEPWTF VQKVGEAVFI PAGCPHQVRN 780
LKSCTKVAVD FVSPENIHEC LRLTEEFRQL PKNHKAREDK LEVKKMVIYA VEQSLKEVET 840
LLPDLSLKEA
Nucleotide Sequence
(Fasta)		ATGGAAGCTG TTGTTACTGA CAATGGAGTC AATCTCAAGC ATAGTGGTCT AATGGAGACT 60
AAACCGGAGA AGGATAAACC GGTTAAGCCA ACAAGTTTGA GCAGTGGTTC AGACATAGAA 120
GAAGAAGAAG AAGAGGAGAG AAGTGTGGGA TCTCTGAAGC GAGTGTCTAA TAAGAAACGG 180
AAACGGTCTA TTGCTGATGA AGGTAGAGTG GCTAAAACCA AATCTTCAAG AGAGAAGAGA 240
GCTGCAAATA GGCGCAAAGA AAAAATAAAT GGTGGTGAAA AGAAACTGAA GCAGAGAAGC 300
TCTGTGAGAA GAAGAGCTAA AACAAAGAAA GAAGACAAGG AACGAGAACA AGAACTGTCA 360
CTAGTTCCTT TCATCGAGCC AACAGATGCT GGTAACAGTT CTGAGTCAGA CTCTCATGTG 420
AAAAACGATA ACTTCAATGA CTGCAGAAGC ATGACAAGGA GTTTAAGGGC AGCTTTGGGA 480
GAGCTTGCGA TTTGCCATCA ATGCTTCAAA GGAGAAAGAA GATTTCTTTT CATTTGCACT 540
TTCTGTGAAG AGAAGTTGTA TTGTTTCCCA TGCATCAAGA AGTGGTATCC TCACTTGTCA 600
CATGATGATG TCATAGAGAA ATGTCCTTTT TGCCGAGGAA CTTGCAACTG TGACGTATGT 660
TTGCAGTCAA GTGGATTAAT AGAGACATCA AAGAGGAAGC TCGGTGATAA CGAAAGATTC 720
CATCACCTTC AGTACTTGAT TGGATCAATG CTTCCTTTCC TCAAAAAGCT ATGCAAAGCG 780
CAAGAGGAAG AGATTGAAAC CGAGGCCAAG ATTCAAGGAC TAATGACTTC CCAAGTTGAT 840
GTATCCGAGA CTCTATGCTC AAACGAAGAG CGTGTCTTTT GTAACCACTG TGCAACCTCA 900
ATAGTTGACT TGCACCGAAG CTGTCCAAAA TGCTCTTACG AACTTTGCCT CAGCTGCTGC 960
CAAGAGATCC GTGGAGGGCT GTTTTCAGAA CGTCCGGAGT TGAAGTTGAA TTTTGTTTAT 1020
AGAGGCAGCA GATACATACA TGGTGAAGAC GCAGAACCAA GCTCCTCTTC TGTTCTTGAC 1080
GATGAAGCTA ATGATGATAA ACCGTCTGTT AACTGGACTG CTAATGATAA CGGGAGAATA 1140
ACATGCGCTT CTAAAGACCT TGGCGGCTGC GGTGAATGTG TTCTGGAGCT GAAACGTATC 1200
TTACCGTTAA CTCGGATGTC AGATTTGGAG AAAAAGGCAG AGAGGTTCTT AGCTTCTTGC 1260
AGCGTCAAGT CTCTGACAGT GTCTAACTGC AGATGTGATT CTGATTTTGA GATGAGTACG 1320
ATGAGGAAAG CAGCTTCGAG AAACAGTTCA AATGACAACA ACCTCTACTC TCCTGATTCT 1380
TTCGACGTCC TGAAGGAAGA GGAGCTTCTC CATTTTCAAG ACCACTGGCG CAAAGGCGAG 1440
CCAGTGATCG TTAGAAACGC TCTCAACAAC ACAGCTGGTT TAAGCTGGGA GCCGAAGGTG 1500
ATGTGGAGAG CGTTATGCGA GAATGTTGAC TCAGCGATGT GTATAGATTC TTTAGCCAAC 1560
TGCGAGGTGA AGATCAAAAC TCGTGACTTC TTCGAAGGAT ACAGCAAAGG GAGATCGTAC 1620
GGTAACTTAT GGCCTGAGAT GCTTAAGCTC AAAGACTGGC CTCCTTCGGA TAAGTTTGAT 1680
AACCTTTTGC CACGTCACTG CGATGAGTTC GTCTCAGCGT TGCCTTTCCA AGAGTACAGC 1740
GATCCTAGAT CGGGTGTTCT CAACATTGCT ACAAAGCTTC CTGAGGGTGT TCTTAAACCT 1800
GATCTTGGTC CCAAGACTTA CATTGCGTAT GGGAATGCAG ATGAGCTTGG GAGAGGGGAC 1860
TCGGTTACTA AGCTTCATTG TGATATGTCA GATGCAGTAA ATATTCTGAT GCATACGGCT 1920
GAAGTAACAC TTAGCAAGGA GCAGCTCTCT GCGATAGAAG CTTTGAAGCT GAAACACAAG 1980
CAGCAGGATG AGAAGGAGCT TCAAGATCAG AATGATTTAG ACAGAGGAGA GATTGTTGCT 2040
GTTAATGATG AGAATGAGTT TCATCATGAT GAGACAGGGA GTGCGCTTTG GGACATATTT 2100
AGAAGAGAAG ATGTTCCAAA GCTTGAAGAG TATTTAAGAA AGCATTGCAA GGAGTTCAGA 2160
CATACTTATT GTTCTCCTGT GACTAAGGTT TATCATCCGA TTCATGACCA AACGTTGTTC 2220
TTAACCGTGG AGCATAAGAG AAAACTCAAG GCCGAGTTTG GGATTGAGCC ATGGACATTT 2280
GTGCAAAAGG TAGGAGAAGC TGTGTTTATT CCTGCTGGTT GTCCTCATCA AGTTCGGAAT 2340
CTCAAGTCTT GCACAAAGGT AGCGGTTGAT TTTGTGTCAC CAGAGAACAT ACATGAGTGT 2400
CTACGTTTGA CTGAAGAGTT TAGACAACTC CCTAAGAACC ATAAAGCCAG AGAAGACAAA 2460
CTTGAGGTAA AGAAGATGGT GATCTACGCA GTGGAACAAT CCTTGAAGGA AGTGGAGACA 2520
TTATTGCCAG ATTTAAGCTT AAAAGAAGCA TAA 2554
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0002 Bo00957s030.1 Brassica oleracea 94 0.0 1611
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 72 0.0 1249
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 71 0.0 1228
WERAM-Thc-0081 EOY28779 Theobroma cacao 61 0.0 899
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 60 0.0 856
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 59 0.0 845
WERAM-Prp-0037 EMJ15852 Prunus persica 59 0.0 843
WERAM-Glm-0083 GLYMA07G39310.2 Glycine max 57 0.0 838
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 59 0.0 818
WERAM-Met-0115 AES92666 Medicago truncatula 55 0.0 788
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 54 0.0 751
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 46 0.0 662
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 47 0.0 651
WERAM-Sei-0128 Si034182m Setaria italica 45 0.0 644
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 47 4e-179 625
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 47 6e-179 625
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 47 1e-178 624
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 47 1e-178 624
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 51 3e-178 623
WERAM-Aet-0048 EMT13865 Aegilops tauschii 50 3e-177 620
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 45 2e-173 607
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 45 6e-165 578
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 54 2e-162 570
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 41 1e-161 567
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 43 2e-160 564
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 43 3e-158 556
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 44 4e-155 546
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 43 2e-154 543
WERAM-Amt-0068 ERN16983 Amborella trichopoda 38 7e-146 515
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 59 9e-141 498
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 46 1e-134 478
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 61 6e-133 472
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 46 1e-131 468
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 43 2e-124 444
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 36 5e-64 243
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 36 2e-62 238
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 36 4e-62 237
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 6e-62 236
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 7e-62 236
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 7e-62 236
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 35 7e-62 236
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 36 9e-62 236
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 36 1e-61 236
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 35 1e-61 236
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 36 1e-61 235
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 36 1e-61 235
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 36 2e-61 235
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 36 2e-61 235
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 36 2e-61 235
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 36 2e-61 235
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 36 2e-61 235
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 36 2e-61 235
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 36 2e-61 235
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 36 2e-61 235
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 36 2e-61 235
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 36 2e-61 235
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 36 2e-61 235
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 36 2e-61 235
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 36 2e-61 235
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 36 2e-61 235
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 36 2e-61 234
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 36 2e-61 234
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 36 2e-61 234
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 36 2e-61 234
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 36 2e-61 234
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 36 2e-61 234
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 36 3e-61 234
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 3e-61 234
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 3e-61 234
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 36 3e-61 234
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 36 3e-61 234
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 36 4e-61 234
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 36 5e-61 233
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 5e-61 233
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 36 6e-61 233
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 36 6e-61 233
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 36 7e-61 233
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 37 7e-61 233
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 36 7e-61 233
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 36 1e-60 232
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 36 2e-60 231
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 35 3e-60 231
Created Date 25-Jun-2016