WERAM Information

Tag Content
WERAM ID WERAM-Brr-0081
Ensembl Protein ID Bra016018.1-P
Gene Name SUVH3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra016018 Bra016018.1 Bra016018.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SUV39 4.80e-43 147.7 506 646
Organism Brassica rapa
Domain Profile
  HMT SUV39
      SUV39.txt   1 vrLqvfktenkGwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesv..enlkegyesdvplssdssntrqekdkeeseyii 94 
                    +r++vfkt+++GwG+r++d i++gsF+c+yaGe+l + e e      +de+++d+++++++  +n+++  +++ p      ++  e+++  s ++i
  Bra016018.1-P 506 FRMEVFKTDHRGWGLRSWDPIRAGSFICEYAGEVLLRMEQE------DDEFVFDTSRVYNSfkWNYEPALVDEDPS-----DEVPEEFNLPSPVLI 590
                    589********************************998765......78999999998887567777777776655.....88899999******* PP
      SUV39.txt  95 dakkegnvgrflnHscspNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                    +ak+ gnv+rf+nHscspN+++q+vfv+ + + + ++afFa ++i+++ ELt+dYg
  Bra016018.1-P 591 SAKSFGNVARFMNHSCSPNVMWQPVFVEGSGESVVHIAFFAIRHIPPMAELTYDYG 646
                    *******************************************************6 PP
Protein Sequence
(Fasta)		MEGVPGINTV PNPNYYDKSI VLDVKPLRSL KPVFPNGNQG PPFVGCPPFG PPSSSSGPSP 60
FYPFGSQQPP DLNQTQDTPP PTFVTPLQSY RPPTEVSNGP SSSSGTKKGV GRPKRNAVSI 120
APSSSSSGTK RGAGRPKGTG NAKKKEKTSL DVVQVVKRDF DSGISAPERE DGNTDLVSSV 180
LMRFDAVRRR LSQVEHGKAG TSKAAGVLMS NGVRTNMKKR VGTVPGIEVG DIFFSRIEMC 240
LVGLHMQTMA GIDYITSKVG ADEEPLATSI VSSGRYDGEA QDPESLIYSG QGGNADKSGQ 300
ASDQKLERGN LALEKSLRKG NGVRVIRGEE DPASKTGKIY IYDGVYTISE SWVEKGKNGC 360
NTFKYKLVRV PNQPPAFGVW KAVHKWKEGL TPRANLILPD ITSGVESKPV SLVNDVDGEK 420
GPSYFTYIST LKPSKQTQPP TIGCSCHGSC AAGNLDCSCV RKNGGDLPYL NGVMLVSRRP 480
MVYECGTTCP CHASCKNKVI QTGLKFRMEV FKTDHRGWGL RSWDPIRAGS FICEYAGEVL 540
LRMEQEDDEF VFDTSRVYNS FKWNYEPALV DEDPSDEVPE EFNLPSPVLI SAKSFGNVAR 600
FMNHSCSPNV MWQPVFVEGS GESVVHIAFF AIRHIPPMAE LTYDYGVSLA SEARDGSLLH 660
GKRKCLCGSV KCRGSFG 677
Nucleotide Sequence
(Fasta)		ATGGAAGGAG TTCCAGGGAT CAATACTGTT CCAAATCCCA ACTATTATGA CAAGTCAATA 60
GTGCTAGATG TAAAGCCACT GCGAAGTTTG AAACCTGTTT TTCCAAATGG TAATCAAGGT 120
CCACCATTTG TTGGTTGTCC TCCTTTTGGC CCTCCTTCCT CTTCTTCTGG GCCTTCACCT 180
TTCTACCCAT TTGGATCACA ACAACCTCCA GATCTCAACC AAACACAGGA CACGCCTCCT 240
CCTACGTTCG TTACACCTCT TCAATCATAT AGACCACCTA CTGAAGTATC AAACGGTCCT 300
AGCAGCTCAA GTGGGACTAA AAAAGGAGTT GGTCGTCCTA AGAGAAATGC AGTATCAATT 360
GCCCCTAGTA GTAGCTCAAG TGGGACCAAA AGAGGAGCTG GTCGTCCTAA GGGAACTGGT 420
AACGCCAAGA AAAAAGAGAA GACTAGTTTG GATGTTGTTC AGGTAGTGAA AAGAGATTTC 480
GACAGCGGGA TCAGTGCACC AGAGCGAGAA GATGGAAACA CTGACTTAGT GAGCAGCGTG 540
TTGATGCGTT TCGACGCTGT CAGGAGGCGG TTAAGCCAAG TAGAGCACGG AAAGGCCGGA 600
ACCTCGAAAG CAGCAGGTGT TCTGATGAGC AACGGAGTGC GTACCAACAT GAAGAAGAGA 660
GTAGGAACAG TTCCTGGAAT CGAGGTTGGA GATATCTTCT TCTCAAGGAT AGAGATGTGT 720
TTGGTCGGTC TTCACATGCA GACCATGGCA GGGATTGACT ATATAACAAG CAAAGTAGGT 780
GCAGATGAGG AGCCGTTAGC TACCAGCATT GTTTCCTCTG GACGTTACGA CGGTGAAGCG 840
CAGGATCCTG AGTCTTTGAT ATACAGCGGA CAAGGAGGGA ATGCTGATAA GAGCGGACAA 900
GCGTCTGATC AGAAGCTTGA GAGAGGGAAT CTAGCGTTGG AGAAGAGCTT GAGGAAAGGG 960
AATGGAGTGA GAGTGATAAG AGGGGAGGAG GATCCAGCAA GTAAAACAGG AAAGATCTAT 1020
ATTTATGATG GAGTTTATAC AATCTCAGAG TCATGGGTGG AGAAGGGGAA GAACGGTTGC 1080
AACACTTTTA AATATAAATT AGTGAGAGTA CCTAATCAGC CACCTGCTTT TGGAGTCTGG 1140
AAGGCTGTTC ATAAGTGGAA GGAAGGTTTA ACTCCAAGAG CAAACCTTAT CCTTCCGGAT 1200
ATAACTTCAG GAGTTGAGAG TAAACCTGTT TCTCTGGTGA ATGATGTGGA TGGTGAGAAG 1260
GGGCCTTCTT ATTTCACTTA CATCTCCACT CTCAAACCCT CTAAACAAAC TCAGCCGCCC 1320
ACTATTGGTT GCTCCTGTCA CGGCTCGTGT GCAGCTGGAA ACCTTGACTG CTCATGCGTC 1380
CGTAAGAACG GCGGTGACCT CCCTTACCTT AACGGCGTGA TGCTTGTTTC CCGGAGGCCT 1440
ATGGTGTATG AATGTGGCAC AACCTGTCCT TGTCACGCCA GCTGCAAAAA CAAAGTGATT 1500
CAGACGGGGC TGAAGTTTCG AATGGAAGTG TTCAAGACAG ACCATCGCGG TTGGGGTTTA 1560
AGGTCTTGGG ATCCTATACG TGCTGGCTCC TTCATATGTG AATATGCTGG TGAGGTCCTC 1620
CTTAGAATGG AGCAAGAAGA TGATGAGTTT GTCTTTGACA CGTCTCGTGT TTACAACTCG 1680
TTTAAGTGGA ACTATGAGCC TGCGTTGGTA GATGAGGACC CTTCCGATGA AGTCCCGGAG 1740
GAGTTTAATC TCCCATCACC GGTCCTGATC AGTGCCAAGA GTTTTGGAAA TGTAGCTCGG 1800
TTCATGAACC ATAGTTGCTC CCCAAACGTT ATGTGGCAGC CGGTTTTTGT TGAAGGAAGC 1860
GGTGAATCGG TTGTCCACAT TGCTTTCTTT GCTATACGTC ACATTCCACC GATGGCTGAG 1920
TTGACTTATG ACTATGGAGT CTCCCTTGCA TCTGAGGCCA GAGATGGGAG CCTTTTACAT 1980
GGAAAGAGGA AGTGCTTATG TGGTTCTGTG AAGTGCCGTG GCTCATTCGG ATAA 2035
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0116 Bo6g116460.1 Brassica oleracea 96 0.0 1239
WERAM-Arl-0122 scaffold_202240.1 Arabidopsis lyrata 78 0.0 1029
WERAM-Art-0027 AT1G73100.1 Arabidopsis thaliana 77 0.0 996
WERAM-Pot-0004 POPTR_0001s07390.1 Populus trichocarpa 54 0.0 706
WERAM-Thc-0121 EOY19472 Theobroma cacao 54 0.0 700
WERAM-Viv-0081 VIT_13s0047g00120.t01 Vitis vinifera 53 0.0 676
WERAM-Prp-0040 EMJ05444 Prunus persica 52 0.0 667
WERAM-Glm-0201 GLYMA15G35450.1 Glycine max 48 0.0 633
WERAM-Met-0060 KEH32911 Medicago truncatula 49 8e-179 624
WERAM-Sol-0115 Solyc09g082050.2.1 Solanum lycopersicum 46 3e-161 566
WERAM-Sot-0091 PGSC0003DMT400077329 Solanum tuberosum 44 4e-160 562
WERAM-Orp-0070 OPUNC07G07250.1 Oryza punctata 53 2e-154 543
WERAM-Sei-0106 Si028938m Setaria italica 53 3e-154 543
WERAM-Brd-0100 BRADI4G25940.1 Brachypodium distachyon 42 9e-154 541
WERAM-Ors-0105 OS11T0602200-01 Oryza sativa 53 1e-153 541
WERAM-Orr-0118 ORUFI11G20440.1 Oryza rufipogon 53 1e-153 541
WERAM-Org-0110 ORGLA11G0160500.1 Oryza glaberrima 53 1e-153 540
WERAM-Orb-0118 OBART11G19080.1 Oryza barthii 53 1e-153 540
WERAM-Orl-0082 KN539783.1_FGP008 Oryza longistaminata 53 1e-153 540
WERAM-Zem-0004 AC233961.1_FGP001 Zea mays 50 2e-153 540
WERAM-Orni-0117 ONIVA11G18710.1 Oryza nivara 53 9e-153 538
WERAM-Sob-0019 Sb02g006620.1 Sorghum bicolor 50 2e-152 536
WERAM-Tra-0143 Traes_4BL_3BB53D481.1 Triticum aestivum 49 3e-152 536
WERAM-Orbr-0036 OB0348G10010.1 Oryza brachyantha 52 7e-152 535
WERAM-Hov-0083 MLOC_63544.1 Hordeum vulgare 52 2e-151 533
WERAM-Orgl-0113 OGLUM11G18450.2 Oryza glumaepatula 52 4e-151 532
WERAM-Aet-0087 EMT20679 Aegilops tauschii 50 3e-147 520
WERAM-Lep-0057 LPERR05G16930.1 Leersia perrieri 49 1e-145 514
WERAM-Ori-0115 BGIOSGA033726-PA Oryza indica 54 2e-145 513
WERAM-Orm-0054 OMERI05G19070.1 Oryza meridionalis 41 5e-145 512
WERAM-Tru-0063 TRIUR3_25291-P1 Triticum urartu 41 8e-143 504
WERAM-Amt-0085 ERM98215 Amborella trichopoda 41 1e-130 464
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 40 2e-91 333
WERAM-Php-0105 PP1S469_7V6.1 Physcomitrella patens 39 4e-87 320
Created Date 25-Jun-2016