WERAM Information

Tag Content
WERAM ID WERAM-Brr-0069
Ensembl Protein ID Bra013261.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra013261 Bra013261.1 Bra013261.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 6.30e-10 40.1 51 159
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt  2 tiClvCgkddegekemvqCdeCd.dwfHlkCvklplsslpegkswyCpsCke 52
                   ++C +Cg  ++++k +  C +C+  + H++C+ ++l+ +pe+  w C  C+e
  Bra013261.1-P 51 NVCDTCGVLGFKNK-LAICHNCRvGAEHTYCMAVKLEDVPEK--WSCHDCVE 99
                   6899**87777776.889*****999**************99..******97 PP
        PHD.txt   3 iClvCgkddegekemvqCdeCd.dwfHlkCvklplsslpegkswyCpsCke 52 
                    +C +Cg+ ++++  +v C++C+  + H++C+ ++   +p + +w+C  C+e
  Bra013261.1-P 112 VCDTCGDLGYEDL-LVICSKCKvGAEHTYCMVVK-VDVPPE-EWICYDCTE 159
                    7****99999887.********99**********.777766.7******97 PP
Protein Sequence
(Fasta)		MEQMKSSVHP GDENKGVVAK NLSSVGEKDF SEEAIVVDDN NELNDMEEEV NVCDTCGVLG 60
FKNKLAICHN CRVGAEHTYC MAVKLEDVPE KWSCHDCVED AGSTKKEIEM IVCDTCGDLG 120
YEDLLVICSK CKVGAEHTYC MVVKVDVPPE EWICYDCTED RDGVPEGEET SSMERRVESY 180
IDFFKLTEEA SSQADLLNRR SRPRMGLDLN KEPNPDFEED PNIGLM 226
Nucleotide Sequence
(Fasta)		ATGGAACAAA TGAAATCCTC CGTGCATCCT GGTGACGAAA ATAAAGGAGT CGTGGCAAAA 60
AATCTGTCTT CAGTTGGTGA AAAGGATTTT TCGGAGGAAG CTATAGTCGT TGACGATAAC 120
AATGAATTGA ATGATATGGA GGAAGAAGTG AACGTATGTG ATACCTGTGG TGTTCTAGGA 180
TTTAAAAATA AGCTTGCTAT TTGTCATAAC TGCAGAGTTG GTGCAGAACA TACTTATTGC 240
ATGGCTGTAA AACTTGAGGA CGTTCCTGAA AAATGGTCTT GCCATGACTG TGTTGAAGAT 300
GCTGGTTCTA CAAAAAAAGA AATCGAAATG ATTGTATGTG ATACATGTGG TGATCTAGGA 360
TATGAAGATT TACTTGTCAT TTGTAGCAAA TGCAAAGTTG GTGCTGAACA TACCTACTGC 420
ATGGTGGTAA AAGTCGACGT TCCCCCCGAG GAATGGATTT GCTATGATTG CACTGAAGAT 480
AGAGATGGAG TGCCAGAAGG AGAAGAAACT AGCTCCATGG AAAGGAGAGT TGAATCCTAT 540
ATTGATTTTT TTAAGTTGAC AGAAGAAGCA TCATCTCAAG CTGATTTGTT GAACAGAAGA 600
AGTCGTCCAA GAATGGGGTT GGACTTGAAC AAAGAACCTA ACCCAGATTT TGAAGAAGAC 660
CCTAACATTG GTCTGATGTA A 682
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tra-0167 Traes_5AL_3942B9A01.2 Triticum aestivum 30 2e-14 76.6
WERAM-Tru-0077 TRIUR3_28806-P1 Triticum urartu 32 4e-14 75.5
WERAM-Sei-0079 Si021317m Setaria italica 64 8e-12 67.8
WERAM-Orb-0116 OBART11G10010.1 Oryza barthii 41 8e-11 64.3
WERAM-Orni-0116 ONIVA11G10100.1 Oryza nivara 41 9e-11 64.3
WERAM-Org-0109 ORGLA11G0088700.1 Oryza glaberrima 41 9e-11 64.3
WERAM-Ori-0035 BGIOSGA011620-PA Oryza indica 37 9e-11 64.3
WERAM-Orgl-0112 OGLUM11G09590.1 Oryza glumaepatula 41 9e-11 64.3
WERAM-Orm-0101 OMERI11G08750.1 Oryza meridionalis 41 1e-10 63.9
WERAM-Orr-0117 ORUFI11G10640.1 Oryza rufipogon 40 1e-10 63.9
WERAM-Orl-0086 KN539942.1_FGP002 Oryza longistaminata 41 1e-10 63.9
WERAM-Lep-0002 LPERR01G06580.1 Leersia perrieri 41 2e-10 62.8
WERAM-Orbr-0124 OB12G19130.1 Oryza brachyantha 49 3e-10 62.8
WERAM-Brd-0095 BRADI4G07950.1 Brachypodium distachyon 49 5e-09 58.2
WERAM-Ors-0104 OS11T0292050-00 Oryza sativa 53 5e-08 55.1
WERAM-Aet-0009 EMT02054 Aegilops tauschii 49 1e-07 54.3
WERAM-Hov-0025 MLOC_18662.1 Hordeum vulgare 35 1e-07 54.3
WERAM-Osl-0003 ABO94520 Ostreococcus lucimarinus 38 2e-07 53.1
WERAM-Arl-0003 Al_scaffold_0001_3838 Arabidopsis lyrata 45 6e-07 51.6
WERAM-Cae-0045 T12D8.1 Caenorhabditis elegans 33 1e-06 50.8
WERAM-Drm-0051 FBpp0087193 Drosophila melanogaster 29 3e-06 49.3
WERAM-Asm-0140 ENSAMXP00000013406.1 Astyanax mexicanus 27 7e-06 48.1
WERAM-Art-0018 AT1G43770.1 Arabidopsis thaliana 45 7e-06 48.1
WERAM-Ten-0186 ENSTNIP00000018287.1 Tetraodon nigroviridis 29 8e-06 47.8
WERAM-Tar-0071 ENSTRUP00000014027.1 Takifugu rubripes 29 8e-06 47.8
Created Date 25-Jun-2016