Tag |
Content |
WERAM ID |
WERAM-Brr-0019 |
Ensembl Protein ID |
Bra004809.1-P |
Gene Name |
ASHH3 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET2 |
2.30e-44 |
151.3 |
123 |
239 |
HMT |
SET1 |
9.10e-33 |
113.9 |
122 |
239 |
|
Organism |
Brassica rapa |
Domain Profile |
HMT SET2
SET2.txt 2 kveliktekkGyGlrakeeikkdefileYvGevidekeakkRlkeyeeekvkdfYlleldkdeviDatkkGnlaRfinhsCePncetqkwtvegel 97 k++li+t+k G G++a+eei+++efi+eYvGevid k +++Rl ++++++ ++fYl e+++d+viDat+kGn +R+inhsC Pn+++qkw ++ge+ Bra004809.1-P 123 KLKLIQTDKCGSGIVAEEEIQQGEFIIEYVGEVIDDKTCEERLWKMKHRGETNFYLCEINRDMVIDATHKGNKSRYINHSCCPNTQMQKWIIDGET 218 789********************************************************************************************* PP SET2.txt 98 rvglfakkkikkgeeltfdYn 118 r+g+fa+++ikkge lt+dY+ Bra004809.1-P 219 RIGIFATCDIKKGEHLTYDYQ 239 ********************7 PP
HMT SET1
SET1.txt 1 kelevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeig.vylfrldedaevvvdatkkgniarfinhscepNceakvvavd 95 k+l++ + ++ g g+va++ei+++e++iEYvGevi ++ ++r + ++++ + yl +++ d +v+dat+kgn++r+inhsc pN + + +d Bra004809.1-P 122 KKLKLIQTDKCGSGIVAEEEIQQGEFIIEYVGEVIDDKTCEERLWKMKHRGETnFYLCEINRD--MVIDATHKGNKSRYINHSCCPNTQMQKWIID 215 57888999999*************************9999999888888887779********..******************************* PP SET1.txt 96 gekkiviyakraIekgeeltydYk 119 ge++i+i+a+ +I+kge ltydY+ Bra004809.1-P 216 GETRIGIFATCDIKKGEHLTYDYQ 239 ***********************6 PP
|
Protein Sequence (Fasta) | MPASKKISDR NHIGQVFNKL LKQIGEAEEE FELPDWLNKG KPTPYIFIKR TSLKDTYLTK 60 KIKKRVEDDG IFCSCSLSPD SSSSSSVCGS NCHCGMLFSS CSSSCKCGIE CKNKPFQHRY 120 VKKLKLIQTD KCGSGIVAEE EIQQGEFIIE YVGEVIDDKT CEERLWKMKH RGETNFYLCE 180 INRDMVIDAT HKGNKSRYIN HSCCPNTQMQ KWIIDGETRI GIFATCDIKK GEHLTYDYQF 240 VQFGADQDCH CGATGCRRKL GVKPKPKLPS DEALKVVVSE VAQTLPEVHQ NGAIHEHDEG 300 KPWNKLEQGQ PCPHNCIGVV LRLSRTRSDR CFCIIRNFDA VTRKHAVMFE DGATEFIDMS 360 KEEDWEILSD Protein Fasta Sequence
>Bra004809.1-P|SET1|Brassica rapa MPASKKISDRNHIGQVFNKLLKQIGEAEEEFELPDWLNKGKPTPYIFIKRTSLKDTYLTKKIKKRVEDDGIFCSCSLSPDSSSSSSVCGSNCHCGMLFSSCSSSCKCGIECKNKPFQHRYVKKLKLIQTDKCGSGIVAEEEIQQGEFIIEYVGEVIDDKTCEERLWKMKHRGETNFYLCEINRDMVIDATHKGNKSRYINHSCCPNTQMQKWIIDGETRIGIFATCDIKKGEHLTYDYQFVQFGADQDCHCGATGCRRKLGVKPKPKLPSDEALKVVVSEVAQTLPEVHQNGAIHEHDEGKPWNKLEQGQPCPHNCIGVVLRLSRTRSDRCFCIIRNFDAVTRKHAVMFEDGATEFIDMSKEEDWEILSD
|
Nucleotide Sequence (Fasta) | ATGCCTGCCT CCAAGAAGAT TTCCGACAGG AACCACATAG GACAAGTGTT CAACAAGTTG 60 CTGAAGCAGA TTGGAGAAGC AGAAGAGGAG TTCGAGTTGC CTGATTGGTT GAACAAAGGG 120 AAACCAACTC CTTACATCTT CATCAAGCGC ACTAGTTTAA AAGATACATA CTTGACGAAG 180 AAAATCAAGA AGAGGGTTGA GGATGATGGA ATATTCTGTT CTTGTTCCTT GTCCCCTGAC 240 TCTTCTTCTT CTTCATCTGT GTGTGGTAGT AACTGCCATT GTGGGATGCT ATTCTCGAGC 300 TGTTCTTCCA GTTGCAAGTG TGGGATTGAG TGTAAGAATA AGCCGTTCCA GCACCGTTAT 360 GTCAAGAAGT TGAAGTTGAT TCAGACTGAT AAATGCGGAT CAGGGATTGT AGCAGAAGAA 420 GAGATTCAAC AAGGAGAGTT TATCATCGAA TATGTAGGAG AAGTTATAGA TGATAAGACT 480 TGTGAAGAGA GGCTTTGGAA GATGAAACAC CGTGGAGAGA CGAATTTCTA TCTGTGTGAG 540 ATAAACAGAG ATATGGTGAT TGATGCCACT CATAAGGGAA ACAAGTCGAG ATACATCAAT 600 CATAGTTGCT GCCCTAATAC GCAGATGCAG AAATGGATCA TTGATGGCGA GACAAGAATC 660 GGCATTTTTG CAACCTGTGA CATAAAGAAG GGAGAGCATC TGACTTATGA CTATCAGTTT 720 GTTCAGTTTG GTGCAGATCA AGACTGCCAC TGTGGAGCCA CAGGTTGCAG AAGGAAGCTT 780 GGGGTGAAAC CAAAACCTAA ATTACCTTCG GATGAAGCTC TTAAGGTAGT GGTATCCGAA 840 GTAGCACAGA CACTGCCTGA GGTGCATCAA AATGGCGCTA TACATGAACA TGATGAAGGA 900 AAGCCATGGA ACAAGCTTGA GCAAGGGCAG CCATGTCCTC ATAACTGCAT TGGTGTGGTG 960 CTCAGGTTAT CTCGCACCAG GAGTGATAGG TGTTTTTGCA TCATTAGAAA CTTTGATGCG 1020 GTTACAAGAA AGCACGCGGT GATGTTTGAG GATGGTGCTA CCGAGTTTAT CGACATGTCC 1080 AAAGAAGAAG ATTGGGAGAT TCTATCTGAC TAA
1114Nucleotide Fasta Sequence
>Bra004809.1-P|SET1|Brassica rapa ATGCCTGCCTCCAAGAAGATTTCCGACAGGAACCACATAGGACAAGTGTTCAACAAGTTGCTGAAGCAGATTGGAGAAGCAGAAGAGGAGTTCGAGTTGCCTGATTGGTTGAACAAAGGGAAACCAACTCCTTACATCTTCATCAAGCGCACTAGTTTAAAAGATACATACTTGACGAAGAAAATCAAGAAGAGGGTTGAGGATGATGGAATATTCTGTTCTTGTTCCTTGTCCCCTGACTCTTCTTCTTCTTCATCTGTGTGTGGTAGTAACTGCCATTGTGGGATGCTATTCTCGAGCTGTTCTTCCAGTTGCAAGTGTGGGATTGAGTGTAAGAATAAGCCGTTCCAGCACCGTTATGTCAAGAAGTTGAAGTTGATTCAGACTGATAAATGCGGATCAGGGATTGTAGCAGAAGAAGAGATTCAACAAGGAGAGTTTATCATCGAATATGTAGGAGAAGTTATAGATGATAAGACTTGTGAAGAGAGGCTTTGGAAGATGAAACACCGTGGAGAGACGAATTTCTATCTGTGTGAGATAAACAGAGATATGGTGATTGATGCCACTCATAAGGGAAACAAGTCGAGATACATCAATCATAGTTGCTGCCCTAATACGCAGATGCAGAAATGGATCATTGATGGCGAGACAAGAATCGGCATTTTTGCAACCTGTGACATAAAGAAGGGAGAGCATCTGACTTATGACTATCAGTTTGTTCAGTTTGGTGCAGATCAAGACTGCCACTGTGGAGCCACAGGTTGCAGAAGGAAGCTTGGGGTGAAACCAAAACCTAAATTACCTTCGGATGAAGCTCTTAAGGTAGTGGTATCCGAAGTAGCACAGACACTGCCTGAGGTGCATCAAAATGGCGCTATACATGAACATGATGAAGGAAAGCCATGGAACAAGCTTGAGCAAGGGCAGCCATGTCCTCATAACTGCATTGGTGTGGTGCTCAGGTTATCTCGCACCAGGAGTGATAGGTGTTTTTGCATCATTAGAAACTTTGATGCGGTTACAAGAAAGCACGCGGTGATGTTTGAGGATGGTGCTACCGAGTTTATCGACATGTCCAAAGAAGAAGATTGGGAGATTCTATCTGACTAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |