WERAM Information

Tag Content
WERAM ID WERAM-Bro-0116
Ensembl Protein ID Bo6g116460.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo6g116460 Bo6g116460.1 Bo6g116460.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HMT SUV39 4.80e-42 145 505 645
Organism Brassica oleracea
Domain Profile
  HMT SUV39
     SUV39.txt   1 vrLqvfktenkGwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesv..enlkegyesdvplssdssntrqekdkeeseyiid 95 
                   +r++vfkt+++GwG+r++d i++gsF+c+yaGe+  + e       e+de+++d+++++++  +n+++  ++        s+++ e+++  s ++i+
  Bo6g116460.1 505 FRMEVFKTDHRGWGLRSWDPIRAGSFICEYAGEVNLRMEQ------EDDEFVFDTSRVYNSfkWNYEPALVDGD-----PSDETPEEFNLPSPVLIS 590
                   589******************************9776655......4789999999988864455555544444.....44667778889******* PP
     SUV39.txt  96 akkegnvgrflnHscspNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                   ak+ gnv+rf+nHscspN+++q+vfv+ + + + ++afFa ++i+++ ELt+dYg
  Bo6g116460.1 591 AKSFGNVARFMNHSCSPNVMWQPVFVEGSGESVVHIAFFAIRHIPPMAELTYDYG 645
                   ******************************************************6 PP
Protein Sequence
(Fasta)		MEGVPGMNTV PNPNYYDKSI VLDVKPLRSL KPVFPNGNQG PPFVGCPPFG PPSSSTGHSP 60
FSPFGAQPPP DLNQTQDTPP PTFVTPIQSY RPPTVVSNGP STSSGTRKGV GRPKRNAVSI 120
VPSSSSSGTK RGAGRPKGTS NAKKKEKTSL DVQVVKRDFD SGISAPERED GNGDLVSSVL 180
TRFDAVRRRL AQVEHGKAGT SKAAGVLMSN GVRTNMKKRV GTVPGIEVGD IFFSRIEMCL 240
VGLHMQTMAG IDYITSKVGA DEEPLATSIV SSGRYDGEAQ DPESLIYSGQ GGNADKNGQA 300
SDQKLERGNL ALEKSLRKGN GVRVIRGEED PASKTGKIYI YDGVYTISES WVEKGKNGCN 360
TFKYKLVRVP NQPPAFGIWK AVLKWKEGLT ARANLILPDI TSGVESKPVS LVNDVDDEKG 420
PSYFTYISTL KHSKQTQPPT IGCSCHGSCA AGNLDCSCVR KNGGDLPYLN GVMLVSRRPM 480
VYECGTTCPC HASCKNKVIQ TGLKFRMEVF KTDHRGWGLR SWDPIRAGSF ICEYAGEVNL 540
RMEQEDDEFV FDTSRVYNSF KWNYEPALVD GDPSDETPEE FNLPSPVLIS AKSFGNVARF 600
MNHSCSPNVM WQPVFVEGSG ESVVHIAFFA IRHIPPMAEL TYDYGVSLTS EARDGSLLHG 660
KRKCLCGSVK CRDSFG 676
Nucleotide Sequence
(Fasta)		ATGGAAGGAG TTCCAGGGAT GAACACTGTT CCAAATCCTA ACTATTATGA CAAGTCGATA 60
GTGCTAGACG TAAAGCCTCT GCGAAGTTTG AAACCTGTTT TTCCAAATGG TAATCAAGGC 120
CCACCCTTTG TTGGTTGTCC ACCTTTTGGC CCTCCTTCTT CTTCTACTGG GCACTCACCT 180
TTCTCCCCAT TTGGAGCACA ACCACCTCCA GATCTCAACC AAACTCAGGA CACGCCTCCT 240
CCTACGTTCG TTACACCTAT TCAATCATAT AGACCACCTA CTGTTGTATC AAACGGTCCT 300
AGTACCTCAA GTGGGACCAG AAAAGGAGTT GGTCGTCCTA AGAGAAATGC AGTATCAATT 360
GTCCCTAGTA GTAGCTCAAG TGGGACTAAA AGAGGAGCTG GTCGTCCTAA GGGAACTAGT 420
AACGCCAAGA AAAAAGAGAA GACTAGTTTG GATGTTCAGG TAGTGAAAAG AGATTTCGAC 480
AGCGGGATCA GTGCACCAGA GCGAGAAGAT GGAAACGGTG ACTTAGTAAG CAGCGTGTTG 540
ACCCGTTTCG ACGCTGTCAG GAGGCGGCTA GCACAAGTAG AGCACGGAAA GGCCGGGACC 600
TCGAAAGCAG CAGGTGTTCT GATGAGCAAC GGAGTGCGTA CCAACATGAA GAAGAGAGTT 660
GGGACTGTTC CTGGAATCGA GGTTGGAGAC ATCTTCTTCT CACGGATAGA GATGTGTTTG 720
GTCGGTCTCC ACATGCAGAC CATGGCAGGG ATTGACTATA TAACAAGCAA AGTCGGCGCA 780
GATGAGGAGC CGTTAGCTAC CAGCATTGTT TCCTCTGGAC GTTACGACGG TGAAGCGCAG 840
GATCCTGAGT CTTTGATATA CAGCGGACAA GGAGGGAATG CTGATAAGAA CGGACAAGCG 900
TCTGATCAGA AGCTTGAGAG AGGGAATCTA GCGTTGGAGA AGAGCTTGAG GAAAGGGAAT 960
GGAGTGAGAG TGATAAGAGG AGAGGAGGAT CCCGCTAGTA AAACAGGAAA GATCTATATA 1020
TATGATGGAG TTTATACAAT CTCGGAGTCA TGGGTGGAGA AAGGGAAGAA CGGTTGCAAC 1080
ACTTTTAAGT ATAAATTGGT GAGAGTTCCT AATCAGCCAC CTGCCTTTGG TATCTGGAAA 1140
GCTGTTCTTA AGTGGAAGGA AGGTTTAACT GCAAGAGCAA ACCTTATCCT TCCGGATATA 1200
ACTTCAGGAG TTGAGAGTAA ACCTGTTTCT CTTGTGAATG ATGTGGACGA TGAGAAGGGG 1260
CCTTCTTATT TCACTTACAT CTCCACACTC AAACACTCTA AACAAACTCA GCCGCCCACT 1320
ATTGGTTGCT CCTGTCACGG ATCGTGTGCA GCTGGAAACC TTGACTGCTC CTGCGTCCGT 1380
AAGAACGGCG GTGACCTCCC TTACCTTAAC GGCGTGATGC TTGTTTCTCG GAGGCCCATG 1440
GTGTATGAAT GTGGCACAAC GTGTCCGTGT CACGCCAGCT GCAAAAACAA AGTGATTCAG 1500
ACGGGGCTGA AGTTTCGAAT GGAAGTGTTC AAGACAGACC ATCGTGGTTG GGGTTTACGT 1560
TCTTGGGATC CTATACGCGC CGGCTCCTTC ATATGTGAAT ATGCTGGTGA GGTCAACCTT 1620
AGAATGGAGC AAGAAGATGA TGAGTTTGTC TTTGATACGT CGCGTGTTTA CAACTCGTTT 1680
AAGTGGAACT ATGAGCCTGC GTTGGTAGAT GGGGACCCTT CGGATGAAAC CCCGGAGGAG 1740
TTTAATCTCC CGTCACCGGT CCTGATCAGT GCCAAGAGTT TTGGAAATGT AGCTCGGTTC 1800
ATGAACCATA GTTGCTCACC TAACGTTATG TGGCAGCCGG TTTTTGTTGA AGGGAGTGGT 1860
GAATCGGTTG TCCACATTGC TTTCTTTGCT ATTCGTCACA TTCCACCGAT GGCTGAGTTG 1920
ACTTATGATT ATGGAGTCTC CCTTACATCT GAGGCCAGAG ATGGGAGCCT TTTACATGGA 1980
AAGAGGAAGT GCTTATGTGG TTCTGTGAAA TGCCGTGACT CATTCGGATA A 2032
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0081 Bra016018.1-P Brassica rapa 96 0.0 1266
WERAM-Arl-0122 scaffold_202240.1 Arabidopsis lyrata 77 0.0 1058
WERAM-Art-0027 AT1G73100.1 Arabidopsis thaliana 77 0.0 1024
WERAM-Pot-0004 POPTR_0001s07390.1 Populus trichocarpa 53 0.0 713
WERAM-Thc-0121 EOY19472 Theobroma cacao 54 0.0 712
WERAM-Viv-0081 VIT_13s0047g00120.t01 Vitis vinifera 52 0.0 687
WERAM-Prp-0040 EMJ05444 Prunus persica 51 0.0 675
WERAM-Met-0060 KEH32911 Medicago truncatula 49 0.0 633
WERAM-Glm-0201 GLYMA15G35450.1 Glycine max 48 0.0 632
WERAM-Sol-0115 Solyc09g082050.2.1 Solanum lycopersicum 46 7e-163 571
WERAM-Sot-0091 PGSC0003DMT400077329 Solanum tuberosum 45 1e-161 567
WERAM-Sei-0106 Si028938m Setaria italica 48 1e-157 553
WERAM-Zem-0004 AC233961.1_FGP001 Zea mays 48 5e-157 552
WERAM-Orp-0070 OPUNC07G07250.1 Oryza punctata 53 6e-156 548
WERAM-Ors-0105 OS11T0602200-01 Oryza sativa 53 2e-155 546
WERAM-Orr-0118 ORUFI11G20440.1 Oryza rufipogon 53 2e-155 546
WERAM-Org-0110 ORGLA11G0160500.1 Oryza glaberrima 53 2e-155 546
WERAM-Orb-0118 OBART11G19080.1 Oryza barthii 53 2e-155 546
WERAM-Orl-0082 KN539783.1_FGP008 Oryza longistaminata 53 2e-155 546
WERAM-Orni-0117 ONIVA11G18710.1 Oryza nivara 53 1e-154 544
WERAM-Brd-0100 BRADI4G25940.1 Brachypodium distachyon 43 1e-154 544
WERAM-Sob-0019 Sb02g006620.1 Sorghum bicolor 49 2e-154 543
WERAM-Tra-0138 Traes_4AS_6A2EE5A91.2 Triticum aestivum 47 2e-154 543
WERAM-Orbr-0036 OB0348G10010.1 Oryza brachyantha 47 7e-154 541
WERAM-Hov-0083 MLOC_63544.1 Hordeum vulgare 53 8e-154 541
WERAM-Orgl-0113 OGLUM11G18450.2 Oryza glumaepatula 52 8e-154 541
WERAM-Aet-0087 EMT20679 Aegilops tauschii 49 2e-150 530
WERAM-Ori-0115 BGIOSGA033726-PA Oryza indica 54 3e-148 523
WERAM-Lep-0057 LPERR05G16930.1 Leersia perrieri 44 1e-146 517
WERAM-Orm-0054 OMERI05G19070.1 Oryza meridionalis 44 2e-145 513
WERAM-Tru-0063 TRIUR3_25291-P1 Triticum urartu 40 1e-143 508
WERAM-Amt-0085 ERM98215 Amborella trichopoda 41 2e-130 464
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 40 6e-91 332
WERAM-Php-0105 PP1S469_7V6.1 Physcomitrella patens 40 6e-89 326
Created Date 25-Jun-2016