WERAM Information

Tag Content
WERAM ID WERAM-Bro-0092
Ensembl Protein ID Bo5g020650.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo5g020650 Bo5g020650.1 Bo5g020650.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Me_Reader_other 1.00e-113 405
Organism Brassica oleracea
Domain Profile
  Me_Reader Me_Reader_other
Query: 1   MDAPEDSSHYFTDFTLAEIVDMETLFKELGDQSLLKDFCQTVASSFSCSVNRKGKSSITW 60
           M A +DSSHYFT+FTL+EIVDME L+KELGDQSL KDFCQTVAS+FSCSVNR GKSSITW
Sbjct: 1   MAASDDSSHYFTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITW 60
Query: 61  KQVQGWFQGRLEKQNQPKFKTAPSSPLLIVDLSNPGGVRDAGSPETV----TYGQRVKGK 116
           KQVQ WFQ +L+ Q+QPK KT PS PL I DLSNP       S  T     T+ Q  KGK
Sbjct: 61  KQVQIWFQEKLKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGK 120
Query: 117 TSDVSDLAFEAKSARDDAWYDVASFMTYRYLRTGELEVRVRFSGFDNQHDEWVNVQTSVR 176
            SD++DLAFEAKSARD AWYDV+SF+TYR LRTGELEVRVRFSGFDN+HDEWVNV+TSVR
Sbjct: 121 ASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVR 180
Query: 177 ERSIPVEPSECGRVKVGELLLCFQDREDEALYCDAHVVNIKRGVHDHRSCNCVFVVRYEF 236
           ERSIPVEPSECGRV VG+LLLCFQ+RED+ALYCD HV+NIKRG+HDH  CNCVF+VRYE 
Sbjct: 181 ERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYEL 240
Query: 237 DGTEETLGLESICRRPD 253
           D TEE+LGLE ICRRP+
Sbjct: 241 DNTEESLGLERICRRPE 257
Protein Sequence
(Fasta)		MDAPEDSSHY FTDFTLAEIV DMETLFKELG DQSLLKDFCQ TVASSFSCSV NRKGKSSITW 60
KQVQGWFQGR LEKQNQPKFK TAPSSPLLIV DLSNPGGVRD AGSPETVTYG QRVKGKTSDV 120
SDLAFEAKSA RDDAWYDVAS FMTYRYLRTG ELEVRVRFSG FDNQHDEWVN VQTSVRERSI 180
PVEPSECGRV KVGELLLCFQ DREDEALYCD AHVVNIKRGV HDHRSCNCVF VVRYEFDGTE 240
ETLGLESICR RPDSEE 256
Nucleotide Sequence
(Fasta)		ATGGATGCTC CCGAAGATTC CTCCCACTAT TTCACCGATT TCACATTGGC CGAGATTGTA 60
GACATGGAGA CTCTGTTCAA GGAGCTCGGT GATCAATCTC TCCTCAAAGA CTTCTGTCAA 120
ACTGTTGCCT CCTCTTTTAG TTGCTCAGTG AATCGGAAGG GAAAATCATC AATAACATGG 180
AAACAAGTAC AGGGTTGGTT TCAGGGGAGG CTAGAGAAGC AAAACCAACC CAAATTCAAG 240
ACTGCGCCAT CTTCCCCTTT GCTGATTGTT GACTTATCAA ATCCAGGTGG TGTCAGAGAT 300
GCTGGAAGTC CTGAAACTGT TACCTATGGT CAAAGAGTGA AAGGTAAGAC CTCTGATGTA 360
TCTGATCTCG CTTTTGAGGC TAAATCTGCT AGGGATGACG CGTGGTATGA CGTGGCATCG 420
TTCATGACTT ATAGATATCT CCGCACTGGT GAACTGGAAG TGCGTGTCCG ATTTTCCGGG 480
TTCGACAACC AACACGATGA GTGGGTGAAC GTGCAAACGT CAGTGCGGGA GCGGTCTATT 540
CCTGTAGAAC CATCAGAGTG TGGGAGAGTG AAGGTTGGAG AGTTGCTTCT GTGTTTTCAG 600
GATAGGGAGG ATGAAGCACT GTACTGTGAT GCTCATGTTG TGAATATCAA GAGAGGGGTT 660
CATGATCACA GGAGTTGTAA CTGCGTGTTT GTTGTTCGGT ACGAGTTTGA CGGTACAGAG 720
GAAACGCTGG GACTTGAAAG TATTTGCCGT CGTCCTGATT CTGAAGAGTG A 772
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0130 Bra026155.1-P Brassica rapa 97 4e-145 510
WERAM-Art-0011 AT1G15215.2 Arabidopsis thaliana 75 2e-113 405
WERAM-Arl-0017 fgenesh1_pg.C_scaffold_1001378 Arabidopsis lyrata 68 4e-107 384
WERAM-Thc-0076 EOY26911 Theobroma cacao 54 8e-74 273
WERAM-Pot-0006 POPTR_0001s19000.1 Populus trichocarpa 53 2e-69 259
WERAM-Viv-0062 VIT_09s0002g03660.t01 Vitis vinifera 49 1e-66 249
WERAM-Met-0171 KEH18213 Medicago truncatula 44 4e-57 218
WERAM-Glm-0091 GLYMA08G21560.5 Glycine max 42 3e-56 215
WERAM-Sot-0007 PGSC0003DMT400006487 Solanum tuberosum 41 2e-54 209
WERAM-Sol-0058 Solyc03g120940.2.1 Solanum lycopersicum 41 2e-53 206
WERAM-Prp-0090 EMJ17222 Prunus persica 62 1e-48 190
WERAM-Orbr-0105 OB09G14330.1 Oryza brachyantha 40 3e-48 189
WERAM-Orni-0098 ONIVA09G05900.1 Oryza nivara 38 3e-48 188
WERAM-Ori-0106 BGIOSGA029938-PA Oryza indica 38 3e-48 188
WERAM-Org-0096 ORGLA09G0048600.1 Oryza glaberrima 38 4e-48 188
WERAM-Orr-0103 ORUFI09G07320.1 Oryza rufipogon 38 6e-48 187
WERAM-Orgl-0096 OGLUM09G07230.2 Oryza glumaepatula 38 1e-47 186
WERAM-Orm-0090 OMERI09G05210.2 Oryza meridionalis 38 2e-46 182
WERAM-Orb-0100 OBART09G06730.1 Oryza barthii 38 2e-43 173
Created Date 25-Jun-2016