WERAM Information

Tag Content
WERAM ID WERAM-Bro-0002
Ensembl Protein ID Bo00957s030.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo00957s030 Bo00957s030.1 Bo00957s030.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 4.40e-73 246.9 582 807
Organism Brassica oleracea
Domain Profile
  HDM JHDM2
      JHDM2.txt   5 rdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellks..ieeeel 85 
                    r g lN+a+klp+ +++pdlgPk+y AyG a e +r++++t+lh+d+sdavnil++             ++ lkkk++++d kel+ +  ++++e+
  Bo00957s030.1 582 RSGVLNIATKLPEGVLKPDLGPKTYIAYGNADELGRGDSVTKLHCDMSDAVNILMHtaevtltkeqlsaIEALKKKHKQQDGKELQDQndFDRGEI 677
                    7899*********************************************************************************864227888** PP
      JHDM2.txt  86 devtrkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipaga 177
                      v+ +     +e  +alW+if+++d++k++e+l+k++ke+++    +v ++++pihdq+++l+ +++++L+ e+G+e+wt+vQk g+av+ipag+
  Bo00957s030.1 678 VTVSDEDGFHHDEAGSALWDIFRREDVPKLEEYLRKHCKEFRHtycsPVTKVYHPIHDQTLFLTVEHKRKLKAEFGIEPWTFVQKVGEAVFIPAGC 773
                    *****999999999*****************************999889999******************************************** PP
      JHDM2.txt 178 pHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                    pHqv+nlksc kva dFvsPEn++ec+rlt+e+r
  Bo00957s030.1 774 PHQVRNLKSCTKVAVDFVSPENIHECLRLTEEFR 807
                    ********************************98 PP
Protein Sequence
(Fasta)		MNMEAVVTDN GVNLKHNGLM ETKPEKEKPV KPTSLSSGSD TEEEEEERSV GSLKRVSNKK 60
RKRSIADEGR VAKTKSSREK RRKEKINGDE KKLKQRSSVK RRAKTKKEDK EREREQELKL 120
VPFIEPTDAG NSSDSDSHVK NENFKDCRSM TRSLRAALGE LAICHQCSKG ERRFLFICTF 180
CEEKLYCFPC IKKWYPHLSY DDVIEKCPFC RGTCNCDICL QSSGLIETSK RKLGDHERFH 240
HLQYLIGSML PFLKMLCKAQ DEEIETEAKI QGLMTSQIDV SETLCSNEER VFCNHCATSI 300
VDLHRSCPKC SYELCLSCCQ EIRGGLFSER PELKLNFVYR GSRYIHGEDA EPSSSSVLED 360
EANDDKPSIK WNADDNGSIA CASKDLGGCG DCVLELKRIL PLTRMSDLEK RAETFLASCS 420
VKSLTVSNCR CDSDFEMSTM RKAASRNSSN DNNLYSPDSF DVLKQEELLH FQDHWRKGEP 480
VIVRNALNNA AGLSWEPKVM WRALCENVDS AMCIDSLANC EVKIKTRDFF EGYIKGRSYG 540
NLWPEMLKLK DWPPSDKFDN LLPRHCDEFI SALPFQEYSD PRSGVLNIAT KLPEGVLKPD 600
LGPKTYIAYG NADELGRGDS VTKLHCDMSD AVNILMHTAE VTLTKEQLSA IEALKKKHKQ 660
QDGKELQDQN DFDRGEIVTV SDEDGFHHDE AGSALWDIFR REDVPKLEEY LRKHCKEFRH 720
TYCSPVTKVY HPIHDQTLFL TVEHKRKLKA EFGIEPWTFV QKVGEAVFIP AGCPHQVRNL 780
KSCTKVAVDF VSPENIHECL RLTEEFRQLP KSHKAREDKL EIKKMVIYAV EQSLKEMEAL 840
LPDLS 845
Nucleotide Sequence
(Fasta)		ATGAACATGG AAGCTGTTGT TACTGACAAT GGAGTCAATC TCAAGCATAA TGGTCTAATG 60
GAAACTAAAC CGGAGAAGGA GAAACCGGTT AAGCCAACAA GTTTGAGCAG TGGTTCAGAC 120
ACAGAAGAAG AAGAAGAAGA GAGAAGTGTG GGATCTCTGA AGCGAGTGTC TAATAAAAAA 180
CGCAAACGGT CTATTGCTGA TGAAGGTAGA GTGGCTAAGA CCAAATCTTC AAGAGAGAAG 240
AGACGCAAAG AAAAAATAAA TGGTGATGAA AAGAAACTGA AGCAGAGAAG CTCTGTGAAA 300
AGAAGAGCTA AAACGAAGAA AGAAGACAAG GAACGTGAAC GTGAACAAGA ACTGAAACTA 360
GTTCCTTTCA TCGAGCCAAC AGATGCTGGT AACAGTTCTG ACTCAGATTC TCATGTGAAA 420
AACGAAAACT TCAAGGACTG CAGAAGCATG ACAAGAAGTT TAAGGGCTGC TTTGGGAGAA 480
CTTGCGATTT GCCATCAATG CTCCAAAGGA GAAAGAAGAT TTCTTTTCAT TTGCACTTTT 540
TGTGAAGAGA AGTTGTATTG TTTCCCATGT ATCAAGAAAT GGTATCCTCA TTTGTCATAT 600
GATGATGTCA TTGAGAAATG TCCTTTTTGC CGTGGAACTT GCAACTGTGA CATATGCTTG 660
CAGTCAAGTG GATTAATCGA GACATCAAAG AGGAAGCTCG GTGATCACGA AAGATTCCAT 720
CACCTCCAGT ACTTGATTGG ATCAATGCTT CCTTTCCTGA AAATGTTATG CAAAGCGCAA 780
GATGAAGAGA TTGAAACCGA GGCAAAGATT CAAGGACTAA TGACTTCTCA AATTGATGTA 840
TCCGAGACTC TATGCTCAAA CGAAGAGAGA GTCTTTTGTA ACCACTGTGC AACTTCAATC 900
GTTGACTTGC ATCGAAGCTG CCCAAAATGC TCTTATGAAC TCTGTCTCAG CTGCTGCCAA 960
GAGATCCGTG GAGGGCTGTT TTCAGAACGT CCGGAGTTGA AGTTGAATTT TGTTTATAGA 1020
GGCAGCAGAT ATATACATGG TGAAGATGCA GAACCAAGCT CATCTTCTGT TCTTGAGGAT 1080
GAAGCTAATG ATGATAAACC GTCTATTAAG TGGAATGCTG ATGATAACGG GAGCATAGCG 1140
TGCGCTTCAA AAGACCTTGG CGGTTGCGGT GACTGTGTCT TGGAGCTGAA ACGTATCTTA 1200
CCGTTAACTC GGATGTCGGA TTTGGAGAAA AGGGCAGAGA CGTTCTTAGC TTCTTGCAGC 1260
GTCAAGTCTC TGACAGTGTC TAACTGCAGA TGTGATTCTG ATTTTGAGAT GAGTACGATG 1320
AGGAAAGCAG CTTCGAGAAA CAGTTCAAAT GACAACAACC TCTACTCTCC TGATTCTTTC 1380
GACGTCCTGA AGCAAGAGGA GCTTCTGCAT TTTCAAGATC ACTGGCGCAA AGGCGAGCCA 1440
GTGATCGTCA GAAACGCGCT TAACAACGCA GCGGGTCTAA GCTGGGAGCC GAAGGTGATG 1500
TGGAGAGCGT TATGCGAGAA TGTTGATTCA GCGATGTGTA TAGATTCTTT AGCTAACTGT 1560
GAGGTGAAGA TCAAAACTCG TGACTTCTTC GAAGGATACA TCAAAGGGAG ATCGTACGGT 1620
AACTTGTGGC CTGAGATGCT GAAGCTCAAA GACTGGCCTC CTTCGGACAA GTTTGATAAC 1680
CTTTTGCCAC GTCACTGCGA TGAGTTCATC TCGGCGTTGC CTTTCCAAGA GTACAGTGAT 1740
CCTAGATCCG GAGTTCTCAA CATTGCTACT AAGCTTCCTG AAGGAGTTCT TAAACCTGAT 1800
CTTGGTCCTA AGACGTACAT TGCGTATGGG AATGCTGATG AGCTTGGAAG AGGGGACTCG 1860
GTCACTAAGC TTCATTGTGA TATGTCAGAT GCAGTAAATA TTCTGATGCA TACGGCTGAA 1920
GTTACACTAA CTAAGGAGCA GCTCTCTGCA ATAGAAGCTC TGAAGAAGAA ACACAAGCAG 1980
CAAGATGGGA AGGAGCTTCA AGATCAGAAT GATTTTGACA GAGGAGAGAT TGTTACTGTT 2040
AGTGATGAAG ATGGGTTTCA TCATGATGAA GCAGGGAGTG CGCTTTGGGA CATATTTAGA 2100
AGAGAAGATG TTCCAAAGCT TGAGGAGTAT TTAAGAAAGC ATTGCAAGGA GTTCAGACAC 2160
ACTTATTGTT CTCCTGTGAC TAAGGTTTAT CATCCGATTC ATGACCAAAC GTTGTTCTTA 2220
ACCGTTGAGC ATAAGAGAAA ACTCAAGGCC GAGTTTGGGA TTGAGCCATG GACATTTGTG 2280
CAAAAGGTGG GAGAAGCTGT GTTTATTCCT GCTGGTTGTC CTCATCAAGT TCGGAATCTC 2340
AAGTCTTGCA CAAAGGTAGC GGTTGACTTT GTGTCACCAG AGAACATACA TGAGTGTCTA 2400
CGTTTGACTG AAGAGTTTAG ACAACTCCCT AAGAGCCATA AAGCCAGAGA AGACAAACTT 2460
GAGATAAAGA AGATGGTGAT TTACGCTGTG GAACAATCCT TGAAGGAAAT GGAGGCATTA 2520
TTGCCAGATT TAAGCTAA 2539
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 94 0.0 1548
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 73 0.0 1218
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 72 0.0 1198
WERAM-Thc-0081 EOY28779 Theobroma cacao 61 0.0 890
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 60 0.0 847
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 60 0.0 842
WERAM-Prp-0037 EMJ15852 Prunus persica 59 0.0 840
WERAM-Glm-0083 GLYMA07G39310.2 Glycine max 58 0.0 840
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 59 0.0 808
WERAM-Met-0115 AES92666 Medicago truncatula 55 0.0 791
WERAM-Pot-0042 POPTR_0004s00770.1 Populus trichocarpa 53 0.0 743
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 46 0.0 661
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 47 0.0 654
WERAM-Sei-0128 Si034182m Setaria italica 46 0.0 645
WERAM-Tra-0176 Traes_5AL_C9FC195D1.2 Triticum aestivum 50 8e-176 615
WERAM-Aet-0048 EMT13865 Aegilops tauschii 50 3e-175 613
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 52 9e-174 608
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 52 2e-173 607
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 52 5e-173 605
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 46 1e-172 604
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 52 2e-172 603
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 45 4e-163 572
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 53 1e-160 564
WERAM-Php-0022 PP1S144_17V6.1 Physcomitrella patens 41 1e-159 561
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 43 5e-155 545
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 47 1e-154 544
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 48 7e-149 525
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 47 2e-148 523
WERAM-Amt-0068 ERN16983 Amborella trichopoda 38 2e-146 517
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 58 8e-140 495
WERAM-Mua-0058 GSMUA_Achr3P14190_001 Musa acuminata 45 7e-135 479
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 59 1e-130 464
WERAM-Org-0037 ORGLA03G0207400.1 Oryza glaberrima 46 5e-130 462
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 42 1e-123 441
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 36 2e-63 241
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 5e-62 236
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 36 6e-62 236
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 36 7e-62 236
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 36 1e-61 235
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 35 1e-61 235
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 35 2e-61 235
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 37 2e-61 235
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 37 3e-61 234
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 37 3e-61 234
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 36 3e-61 234
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 37 3e-61 234
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 37 4e-61 234
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 37 4e-61 234
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 37 4e-61 234
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 37 4e-61 234
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 37 4e-61 234
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 37 4e-61 234
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 37 4e-61 234
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 36 4e-61 234
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 37 4e-61 234
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 37 4e-61 234
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 37 4e-61 234
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 37 4e-61 234
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 37 4e-61 234
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 4e-61 234
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 36 4e-61 233
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 37 4e-61 233
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 37 4e-61 233
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 37 4e-61 233
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 37 5e-61 233
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 37 5e-61 233
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 36 5e-61 233
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 37 5e-61 233
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 37 5e-61 233
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 37 5e-61 233
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 37 9e-61 232
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 36 1e-60 232
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 37 2e-60 231
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 36 3e-60 231
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 36 3e-60 231
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 36 3e-60 231
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 36 3e-60 231
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 35 4e-60 230
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 35 4e-60 230
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 36 5e-60 230
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 36 5e-60 230
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 36 7e-60 229
Created Date 25-Jun-2016