WERAM Information

Tag Content
WERAM ID WERAM-Arl-0003
Ensembl Protein ID Al_scaffold_0001_3838
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Al_scaffold_0001_3838 Al_scaffold_0001_3838 Al_scaffold_0001_3838
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.80e-08 32.8 8 58
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                PHD.txt  2 tiClvCgkddegekemvqCdeCd.dwfHlkCvklplsslpegkswyCpsCke 52
                           ++C++Cg+ +++e  +v Cd+C+ + +H +C++++ ++ +e   w+C+ C +
  Al_scaffold_0001_3838  8 PVCQTCGDIGFEEA-LVFCDSCKiESIHRYCIGITPTPFTEYITWICEDCDA 58
                           58****99999987.********************888887779******85 PP
Protein Sequence
(Fasta)		MSLHIKAPVC QTCGDIGFEE ALVFCDSCKI ESIHRYCIGI TPTPFTEYIT WICEDCDASD 60
SDSYCNEVDQ TAKLTHILKK KKKKKKKRRN RTPLVLAEDN GLQDATNVEP VEGSFSPIQE 120
TVGSKREESS GSRKPHELTG LDGDRASVSE ADKSSSVPDH SSCTSKRKEV DQTGHNLEKS 180
EKKKKKKKKK SSNHSPPVLA VEEHEIRDTT NVEHVGVSSS SPTKEMMESK RQENSDSRKP 240
HELTGLVGDR ASVSETANSS SVPDYNSCVT KKRKLSSGSI PVAENRQLAD GNSSCKVAES 300
NTPQTTERLS SRHYRAQPIK IPIWRGLMSV KGGNNCIMDG IVAHVSSLAC PKVHETASSL 360
KGSLSAEVLP RLEVWPKTFL KNGGPKDESI ALFFFPSSES NDEKVFNSLV DKMKTNDSAM 420
RFVLNDAELL LFTSYMLPKD SWTKKGDYRL QLLTRSITCG ASSSPDRLLD ISHSRLATFN 480
SL 482
Nucleotide Sequence
(Fasta)		ATGTCTTTAC ATATCAAGGC ACCTGTTTGT CAAACTTGTG GCGACATTGG TTTTGAAGAA 60
GCACTAGTCT TTTGTGACTC TTGTAAGATT GAGTCTATTC ACCGCTATTG TATAGGCATA 120
ACACCGACTC CTTTTACGGA ATACATAACT TGGATTTGTG AGGACTGTGA TGCGAGTGAC 180
AGTGATTCTT ATTGCAATGA AGTTGATCAA ACTGCTAAGC TTACACATAT CTTGAAGAAG 240
AAGAAGAAGA AAAAGAAGAA GAGGAGAAAT CGCACTCCAC TGGTTTTAGC TGAGGACAAT 300
GGGCTCCAGG ATGCTACCAA TGTTGAACCT GTGGAGGGTT CTTTTTCACC AATTCAAGAA 360
ACAGTGGGAT CTAAGAGAGA AGAAAGCTCA GGTAGCAGAA AGCCTCATGA ATTGACTGGT 420
TTAGATGGAG ATAGAGCATC TGTTTCGGAG GCGGATAAGT CATCTAGTGT ACCAGATCAT 480
AGCTCTTGTA CCAGCAAAAG GAAAGAAGTT GATCAGACTG GACATAACTT GGAGAAGAGT 540
GAGAAAAAGA AGAAGAAGAA GAAGAAAAAG AGCAGCAATC ATTCACCACC GGTTTTAGCT 600
GTCGAGGAAC ATGAGATTCG GGATACTACG AATGTTGAAC ATGTGGGGGT GTCTTCTTCT 660
TCACCAACTA AAGAAATGAT GGAGTCTAAG AGACAAGAAA ACTCAGATAG TAGAAAACCT 720
CATGAATTGA CTGGTTTAGT TGGAGATAGA GCATCTGTTT CGGAGACCGC CAATTCATCT 780
AGTGTGCCTG ATTATAATTC TTGTGTCACC AAAAAAAGAA AATTAAGTTC TGGAAGCATA 840
CCGGTTGCTG AAAATAGACA GTTAGCTGAT GGGAATAGTT CTTGCAAAGT GGCTGAATCA 900
AATACGCCTC AAACGACTGA GAGGTTGTCA TCTAGGCATT ATAGAGCACA ACCTATCAAA 960
ATACCGATAT GGAGGGGATT GATGTCTGTT AAAGGAGGAA ACAACTGTAT CATGGATGGA 1020
ATTGTTGCTC ATGTATCAAG CTTAGCATGT CCTAAAGTCC ATGAAACGGC GAGTTCATTA 1080
AAGGGCTCCC TCTCTGCTGA AGTACTTCCC AGGTTGGAAG TATGGCCAAA AACCTTTCTT 1140
AAGAATGGAG GACCTAAGGA TGAAAGTATT GCTCTGTTTT TCTTCCCTTC CAGTGAAAGT 1200
AATGATGAAA AGGTTTTCAA TTCCCTTGTT GATAAAATGA AGACGAATGA TTCCGCGATG 1260
AGATTTGTGC TTAATGATGC AGAACTTCTA CTGTTCACCT CTTATATGTT ACCAAAGGAT 1320
TCTTGGACTA AGAAGGGTGA TTATCGTTTG CAGCTTTTAA CTCGAAGTAT TACCTGTGGG 1380
GCGTCTTCAA GCCCAGACAG ACTTCTCGAC ATTAGTCACT CTAGACTCGC TACCTTTAAC 1440
AGTCTCTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0018 AT1G43770.1 Arabidopsis thaliana 76 3e-152 535
WERAM-Org-0109 ORGLA11G0088700.1 Oryza glaberrima 39 2e-15 80.9
WERAM-Orm-0101 OMERI11G08750.1 Oryza meridionalis 39 3e-15 80.5
WERAM-Ori-0035 BGIOSGA011620-PA Oryza indica 39 4e-15 80.5
WERAM-Lep-0117 LPERR12G08750.1 Leersia perrieri 39 6e-15 79.7
WERAM-Orgl-0112 OGLUM11G09590.1 Oryza glumaepatula 40 1e-14 78.6
WERAM-Orni-0116 ONIVA11G10100.1 Oryza nivara 40 1e-14 78.6
WERAM-Orb-0116 OBART11G10010.1 Oryza barthii 40 2e-14 78.2
WERAM-Orr-0117 ORUFI11G10640.1 Oryza rufipogon 40 2e-14 78.2
WERAM-Orbr-0124 OB12G19130.1 Oryza brachyantha 36 3e-14 77.4
WERAM-Tra-0167 Traes_5AL_3942B9A01.2 Triticum aestivum 37 2e-13 75.1
WERAM-Brd-0095 BRADI4G07950.1 Brachypodium distachyon 28 2e-13 74.7
WERAM-Sei-0079 Si021317m Setaria italica 38 2e-13 74.3
WERAM-Orl-0086 KN539942.1_FGP002 Oryza longistaminata 39 3e-13 73.9
WERAM-Tru-0077 TRIUR3_28806-P1 Triticum urartu 38 1e-12 72.0
WERAM-Aet-0009 EMT02054 Aegilops tauschii 37 4e-11 67.0
WERAM-Brr-0069 Bra013261.1-P Brassica rapa 45 1e-06 52.4
Created Date 25-Jun-2016