WERAM Information

Tag Content
WERAM ID WERAM-Art-0145
Ensembl Protein ID AT5G60410.1
Gene Name SIZ1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G60410 AT5G60410.1 AT5G60410.1
AT5G60410 AT5G60410.2 AT5G60410.2
AT5G60410 AT5G60410.3 AT5G60410.3
AT5G60410 AT5G60410.4 AT5G60410.4
AT5G60410 AT5G60410.5 AT5G60410.5
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-07 32.6 114 406
Organism Arabidopsis thaliana
Domain Profile
  Me_Reader PHD
      PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslpeg.....kswyCpsCk 51 
                   C+ Cg++ e ++ m+qC+   C+ w H+ Cv lp +++  g     +s+yC+ C+
  AT5G60410.1 114 RCV-CGNSLETDS-MIQCEDprCHVWQHVGCVILPDKPMD-GnpplpESFYCEICR 166
                  698.*87777766.*********************44444.34688888******8 PP
      PHD.txt  27 fHlkCvklp..lsslpegkswyCpsCk 51 
                  +H+ C +l    +  + +++w Cp C 
  AT5G60410.1 380 VHMGCFDLDvfVELNQRSRKWQCPICL 406
                  8******9975333333368******6 PP
Protein Sequence
(Fasta)		MDLEANCKEK LSYFRIKELK DVLTQLGLSK QGKKQELVDR ILTLLSDEQA ARLLSKKNTV 60
AKEAVAKLVD DTYRKMQVSG ASDLASKGQV SSDTSNLKVK GEPEDPFQPE IKVRCVCGNS 120
LETDSMIQCE DPRCHVWQHV GCVILPDKPM DGNPPLPESF YCEICRLTRA DPFWVTVAHP 180
LSPVRLTATT IPNDGASTMQ SVERTFQITR ADKDLLAKPE YDVQAWCMLL NDKVLFRMQW 240
PQYADLQVNG VPVRAINRPG GQLLGVNGRD DGPIITSCIR DGVNRISLSG GDVRIFCFGV 300
RLVKRRTLQQ VLNLIPEEGK GETFEDALAR VRRCIGGGGG DDNADSDSDI EVVADFFGVN 360
LRCPMSGSRI KVAGRFLPCV HMGCFDLDVF VELNQRSRKW QCPICLKNYS VEHVIVDPYF 420
NRITSKMKHC DEEVTEIEVK PDGSWRVKFK RESERRELGE LSQWHAPDGS LCPSAVDIKR 480
KMEMLPVKQE GYSDGPAPLK LGIRKNRNGI WEVSKPNTNG LSSSNRQEKV GYQEKNIIPM 540
SSSATGSGRD GDDASVNQDA IGTFDFVANG MELDSISMNV DSGYNFPDRN QSGEGGNNEV 600
IVLSDSDDEN DLVITPGPAY SGCQTDGGLT FPLNPPGIIN SYNEDPHSIA GGSSGLGLFN 660
DDDEFDTPLW SFPSETPEAP GFQLFRSDAD VSGGLVGLHH HSPLNCSPEI NGGYTMAPET 720
SMASVPVVPG STGRSEANDG LVDNPLAFGR DDPSLQIFLP TKPDASAQSG FKNQADMSNG 780
LRSEDWISLR LGDSASGNHG DPATTNGINS SHQMSTREGS MDTTTETASL LLGMNDSRQD 840
KAKKQRSDNP FSFPRQKRSV RPRMYLSIDS DSE 873
Nucleotide Sequence
(Fasta)		GTCTGGGTTT GGTTGTCTTT TTATTTTCCT CTTCCTTGGC CAAAGAAAAT CTTATCGTAG 60
CTGTGAAAAC CCTAGTTTCT AATCATCTCA ATTCTCTCAT TAACCTATCA ATTTCGATAG 120
GGTTTGATCA AGTATCCGAT TTCATGATCG GTTGCTGTAT GGAGACTAAT TGCTGGAGTT 180
TAGGTTCGTG TGTTTTGAAC TGAGCTTTTG GTTCTTGTTT GTGTCTGGTG TTGAAGACAT 240
GGATTTGGAA GCTAATTGTA AGGAAAAACT TTCATATTTT CGGATAAAAG AGCTCAAGGA 300
TGTGCTCACT CAGCTGGGAC TTTCGAAACA GGGAAAGAAG CAGGAACTTG TCGACCGGAT 360
CTTGACCCTT CTTTCTGATG AACAAGCTGC CAGGTTGTTG TCTAAAAAGA ATACAGTGGC 420
AAAGGAAGCA GTTGCCAAAT TAGTGGACGA TACATATAGG AAAATGCAAG TATCTGGGGC 480
AAGTGATTTA GCATCAAAAG GACAAGTGAG TTCAGATACC AGTAATCTGA AAGTTAAGGG 540
AGAGCCTGAA GACCCCTTCC AACCAGAAAT TAAAGTTCGA TGTGTTTGTG GAAACTCGCT 600
AGAAACAGAC TCAATGATAC AGTGTGAGGA TCCAAGATGC CATGTTTGGC AGCATGTTGG 660
CTGTGTTATT CTCCCAGATA AGCCTATGGA TGGGAATCCA CCACTTCCGG AATCATTTTA 720
TTGTGAAATC TGCCGACTTA CTCGAGCTGA CCCATTTTGG GTTACAGTGG CACATCCACT 780
CTCTCCAGTG AGGCTGACTG CAACGACTAT CCCAAATGAT GGTGCAAGCA CAATGCAGAG 840
TGTGGAGAGA ACATTTCAAA TCACAAGGGC AGACAAGGAC CTTTTGGCCA AACCAGAGTA 900
CGATGTTCAG GCTTGGTGTA TGCTCTTGAA TGATAAAGTT CTCTTTAGGA TGCAGTGGCC 960
TCAGTATGCT GATCTGCAGG TCAATGGTGT GCCTGTACGT GCAATTAATC GACCTGGAGG 1020
ACAGCTTTTG GGAGTCAACG GCCGCGACGA TGGACCCATT ATTACATCTT GTATTAGGGA 1080
TGGAGTTAAC AGAATATCCT TGAGTGGAGG TGACGTTCGG ATTTTTTGTT TTGGGGTCAG 1140
ACTTGTGAAG CGCAGGACTC TACAACAGGT TCTAAATTTG ATTCCAGAAG AGGGTAAAGG 1200
GGAGACTTTT GAAGATGCTC TTGCACGTGT CCGCCGATGC ATTGGAGGTG GAGGTGGAGA 1260
TGATAATGCC GACAGTGATA GTGACATTGA AGTTGTTGCT GATTTCTTCG GTGTCAATCT 1320
TCGGTGTCCT ATGAGCGGTT CTAGGATAAA AGTTGCTGGG AGATTTTTAC CCTGTGTGCA 1380
CATGGGCTGT TTTGACCTTG ATGTGTTTGT GGAGTTGAAT CAACGTTCCA GAAAGTGGCA 1440
GTGCCCTATT TGTCTGAAGA ACTACTCAGT GGAGCATGTA ATCGTCGATC CTTATTTTAA 1500
CCGTATCACG TCTAAGATGA AGCATTGTGA TGAAGAGGTG ACTGAAATTG AAGTGAAACC 1560
TGATGGTTCT TGGCGTGTAA AGTTCAAAAG AGAGAGTGAG CGAAGGGAAC TGGGGGAACT 1620
CTCACAGTGG CATGCACCTG ATGGTAGCCT TTGCCCCTCT GCTGTTGATA TTAAACGGAA 1680
GATGGAAATG TTACCGGTTA AGCAAGAAGG TTACTCAGAT GGTCCAGCCC CGCTAAAACT 1740
TGGAATAAGG AAGAATCGTA ATGGCATTTG GGAAGTTAGC AAACCTAATA CAAATGGATT 1800
ATCTTCCAGT AATAGGCAAG AAAAGGTTGG GTATCAGGAG AAGAATATTA TACCAATGAG 1860
TAGTAGTGCT ACTGGAAGTG GTAGGGATGG TGATGATGCA AGCGTAAACC AGGATGCTAT 1920
TGGAACTTTT GACTTTGTAG CCAACGGCAT GGAACTTGAT TCCATTTCCA TGAATGTTGA 1980
TTCAGGTTAT AACTTTCCTG ACAGAAACCA ATCTGGCGAG GGTGGAAATA ATGAAGTCAT 2040
CGTTCTGAGT GATTCTGATG ACGAGAATGA TTTAGTGATC ACTCCAGGGC CTGCATACAG 2100
TGGTTGTCAA ACAGATGGTG GACTTACTTT TCCACTGAAC CCTCCTGGAA TAATTAACTC 2160
ATATAATGAG GACCCACACA GCATAGCTGG GGGAAGTTCA GGCTTAGGTC TTTTCAATGA 2220
TGATGATGAA TTTGATACGC CCCTTTGGTC ATTTCCTTCT GAAACTCCAG AAGCCCCTGG 2280
GTTCCAACTA TTTAGATCTG ATGCTGACGT TTCAGGAGGT TTAGTTGGTT TGCATCATCA 2340
TAGTCCACTA AACTGTTCTC CTGAAATAAA TGGAGGTTAT ACCATGGCTC CTGAGACATC 2400
AATGGCATCT GTTCCTGTGG TTCCTGGCTC TACTGGCCGA TCTGAAGCAA ACGATGGCCT 2460
AGTTGACAAT CCTCTTGCAT TTGGTAGAGA CGATCCCTCA CTTCAAATAT TTTTGCCAAC 2520
AAAACCAGAT GCTTCAGCTC AGTCGGGTTT TAAAAACCAA GCTGATATGT CAAATGGTCT 2580
CCGTAGTGAA GACTGGATCT CGCTTAGGCT AGGCGATAGC GCCTCTGGGA ATCATGGAGA 2640
TCCTGCAACT ACAAACGGGA TTAACTCAAG CCATCAGATG TCTACGAGGG AAGGTTCTAT 2700
GGATACTACA ACAGAGACTG CGTCGTTGCT TCTGGGTATG AATGACAGTA GACAAGACAA 2760
GGCAAAGAAG CAAAGATCAG ATAATCCATT TTCATTTCCT CGCCAGAAGC GTTCTGTAAG 2820
ACCTCGGATG TACCTCTCCA TTGACTCGGA TTCTGAGTAA TATTCTTCCT GATTTGTCTG 2880
TTCTGTTGTG TCTCTCTTGG GATGATTCGG TGTTCCTTTT GATTCTTAAC GCTATGCACA 2940
GAACAATGAA CAGGATCATC AGACAAGACA CCGGAGTTTA AACAAGATTT GCATAATTCT 3000
CTGTGCAGGC AAGAATTGAA CCGGTATTGA TATTTTCACT TGTATGATGT TGTTGACTCT 3060
CTCTTCAATA TCGGTTCAGA ATCTTGGCCT TGTCTGCTAC ACTGCAGGAT GTAATTTGCA 3120
AAGCGAAGCA CTGGCTGATT TAGTTTCTCT GATAGAAAAG AAAAGTGGGC ACAGTGGTTC 3180
CGATTTAATT AGTAGTTTGT ATACTCGAAA TAGGTTTTTT TTGTGTGGAC GATGATAAAA 3240
TTACTTCGAA GCCAGGAGCT ATAGAGAGAT ATAGCAATGT AAATTATGGG CTCCAAATTT 3300
TATTTATTAA TTAGAAAAAT TCAGCTCTTC TCCTCC 3337
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 95 0.0 1664
WERAM-Brr-0105 Bra020249.1-P Brassica rapa 81 0.0 1366
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 65 0.0 1099
WERAM-Glm-0141 GLYMA12G07590.1 Glycine max 65 0.0 1089
WERAM-Met-0101 AES88651 Medicago truncatula 63 0.0 1076
WERAM-Sol-0139 Solyc11g069160.1.1 Solanum lycopersicum 62 0.0 1063
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 52 0.0 842
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 52 0.0 831
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 53 0.0 829
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 52 0.0 822
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 52 0.0 821
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 52 0.0 815
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 52 0.0 800
WERAM-Tru-0081 TRIUR3_29937-P1 Triticum urartu 49 7e-180 628
WERAM-Tra-0179 Traes_5AL_F340B783A.1 Triticum aestivum 48 2e-177 620
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 48 1e-173 608
WERAM-Aet-0041 EMT28925 Aegilops tauschii 48 4e-170 596
WERAM-Sem-0107 EFJ20543 Selaginella moellendorffii 46 4e-146 516
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 45 6e-145 512
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 48 6e-130 462
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 59 3e-113 407
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 46 1e-75 282
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 54 8e-27 120
WERAM-Scp-0049 SPCC645.13.1:pep Schizosaccharomyces pombe 44 2e-07 55.8
Created Date 25-Jun-2016