WERAM Information

Tag Content
WERAM ID WERAM-Art-0091
Ensembl Protein ID AT3G57980.1
Uniprot Accession Q9M2Q0; Q9M2Q0_ARATH
Genbank Protein ID NP_191357.1
Protein Name DNA-binding bromodomain-containing protein
Genbank Nucleotide ID NM_115660.1
Gene Name T10K17.190;BRD7;At3g57980
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G57980 AT3G57980.1 AT3G57980.1
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.70e-14 52.5 286 379
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   1 kehevsepFrepvdpqleipdYydiikePmdLstikerleegnYss.peefvkDvrlifnNakaynenk 68 
                  ++h++ ++F+++ +  +e  dYy ii++++d++ i++r+eeg+Y++  ++f +D+ l++nN + ++++ 
  AT3G57980.1 286 QSHPIGSHFSRRLET-QETSDYYRIIRQHIDFEMIRSRVEEGYYKTaRTKFFRDLLLLINNVRVFYGEP 353
                  579999*********.8*****************************99*****************9876 PP
    BROMO.txt  19 ipdYydiikePmdLstiker 38 
                  +++ y++ik+ m ++  k++
  AT3G57980.1 360 AKQLYQLIKKQMSFKIPKQT 379
                  55668999999999987666 PP
Protein Sequence
(Fasta)		MEELLLACAV HRHGTDSWDS VASEVHKQNS TFRTLTAIDC RHKYNDLKRR FSRNLVSPGS 60
ADEETLAAEI SSVPWLEELR KLRVDELRRE VERYDLSISS LQLKVKTLED EREKSLKTEN 120
SDLDRIAETK ENHTESGNNS GVPVTELKNS PDPNDNSPGT GSENTNRAVK IAEPVDEEPN 180
RIGGEDNDEK PAREDSGRGS CESVAKESDR AEPKREGNDS PELVESMDES KGEEDTKETS 240
DGQSSASFPR KETVDQDQPD NKDQSLTVNK IFVESQPLSD FIEILQSHPI GSHFSRRLET 300
QETSDYYRII RQHIDFEMIR SRVEEGYYKT ARTKFFRDLL LLINNVRVFY GEPSPEFNAA 360
KQLYQLIKKQ MSFKIPKQTL PPPKEDALVT SKEEVKVSSL KPTLSVPIIA CRKRSSLAVR 420
SPASVTETLK KKTRVVPTVD EKQVSEEEEG RPSDKDEKPI VSKKMARGAA PSTAKKVGSR 480
NVKTSLNAGI SNRGRSPNGS SVLKKSVQQK KGINTSGGSK KQSAASFLKR MKGVSSSETV 540
VETVKAESSN GKRGAEQRKS NSKSEKVDAV KLPAGQKRLT GKRPTIEKGS PTKKNSGVAS 600
KRGTASLMAK RDSETSEKET GSSTRPKKRS KR 632
Nucleotide Sequence
(Fasta)		ATGGAGGAGC TCCTCCTCGC CTGCGCCGTT CACCGTCACG GTACTGATTC ATGGGACTCC 60
GTCGCTTCTG AAGTCCATAA ACAGAACTCC ACTTTTCGTA CACTCACCGC CATCGACTGT 120
CGTCACAAGT ACAACGATCT CAAGCGCCGA TTCTCCCGTA ACCTGGTCTC GCCAGGATCT 180
GCCGATGAAG AAACCCTCGC CGCCGAGATC TCTTCCGTTC CTTGGCTTGA GGAGTTGAGA 240
AAGCTCCGTG TCGATGAACT CCGACGAGAA GTCGAACGTT ACGATCTATC CATCTCGTCA 300
TTGCAGTTGA AGGTGAAAAC ATTGGAAGAT GAAAGAGAGA AGAGCTTGAA AACTGAGAAT 360
TCAGATCTAG ATAGAATCGC GGAGACGAAA GAGAACCACA CTGAATCGGG CAACAACTCC 420
GGCGTACCGG TTACTGAGCT GAAAAATTCT CCAGATCCGA ATGATAATAG TCCTGGAACC 480
GGATCTGAGA ACACGAACAG AGCTGTTAAA ATCGCTGAAC CAGTGGACGA AGAACCGAAC 540
CGGATCGGCG GAGAAGACAA CGACGAGAAG CCGGCAAGAG AGGATTCGGG TAGAGGAAGT 600
TGCGAGAGCG TGGCGAAGGA ATCGGATAGA GCAGAACCAA AAAGAGAGGG AAATGACTCG 660
CCTGAGTTAG TTGAGTCAAT GGACGAGTCG AAAGGAGAGG AAGATACGAA AGAAACGAGT 720
GATGGGCAGA GCTCGGCGAG CTTCCCGAGA AAGGAGACGG TAGACCAAGA CCAACCGGAT 780
AACAAAGATC AATCTCTCAC CGTCAATAAG ATCTTCGTTG AATCTCAGCC GTTGAGTGAT 840
TTCATCGAGA TTCTTCAGTC TCACCCCATT GGCTCTCACT TTTCGCGCCG GCTCGAAACC 900
CAGGAAACAT CCGACTACTA TAGGATAATA AGGCAACACA TAGACTTTGA GATGATTCGA 960
AGTCGTGTGG AAGAGGGTTA CTACAAAACT GCCAGGACCA AGTTTTTTCG GGATTTACTG 1020
CTACTAATCA ACAATGTGAG AGTTTTCTAT GGCGAGCCAT CGCCTGAGTT TAATGCAGCA 1080
AAACAGCTTT ACCAACTCAT CAAGAAACAG ATGAGTTTCA AGATTCCTAA ACAAACCTTA 1140
CCACCACCAA AAGAGGATGC CTTGGTGACG TCTAAGGAGG AAGTCAAAGT CTCTTCTCTT 1200
AAACCAACAC TTTCAGTGCC TATTATAGCT TGTCGGAAAC GTAGTTCCTT GGCTGTTAGA 1260
TCTCCAGCGT CAGTCACTGA AACTTTGAAG AAAAAGACTA GAGTAGTTCC AACAGTTGAT 1320
GAGAAGCAAG TTTCAGAAGA GGAGGAAGGG AGACCCTCTG ATAAAGATGA GAAACCTATT 1380
GTTTCTAAGA AGATGGCTAG AGGAGCAGCA CCCTCAACAG CTAAAAAAGT AGGGAGCAGA 1440
AACGTTAAGA CCAGTTTGAA TGCTGGTATC TCTAATAGAG GCCGATCTCC AAACGGTAGC 1500
TCTGTGCTGA AGAAAAGTGT TCAACAAAAG AAGGGTATCA ACACCAGTGG TGGCTCAAAA 1560
AAGCAAAGTG CTGCTAGTTT TCTTAAGAGA ATGAAAGGGG TTTCATCATC TGAAACAGTC 1620
GTAGAGACAG TGAAGGCTGA ATCCTCTAAT GGAAAGAGAG GAGCTGAACA GAGGAAAAGT 1680
AATAGTAAGA GTGAGAAAGT GGATGCAGTA AAACTGCCTG CTGGTCAGAA ACGATTAACT 1740
GGGAAAAGGC CAACAATTGA AAAGGGTAGT CCTACAAAGA AAAACAGTGG TGTCGCCTCT 1800
AAAAGAGGCA CTGCTTCTCT GATGGCAAAG CGGGACAGTG AAACTAGTGA AAAGGAAACA 1860
GGTTCTTCTA CTCGTCCGAA GAAGCGTTCA AAGAGGTGA
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome
--
Interpro

IPR001487--Bromodomain
IPR017930--Myb_dom
IPR001005--SANT/Myb
PROSITE

PS50014--BROMODOMAIN_2
PS51294--HTH_MYB
Pfam

PF00439--Bromodomain
PF00249--Myb_DNA-binding
Gene Ontology

GO:0003677--F:DNA binding
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0012 Al_scaffold_0005_2712 Arabidopsis lyrata 88 0.0 981
WERAM-Bro-0155 Bo8g092340.1 Brassica oleracea 58 1e-139 494
WERAM-Brr-0037 Bra007371.1-P Brassica rapa 57 5e-137 485
WERAM-Thc-0062 EOY09477 Theobroma cacao 44 5e-98 356
WERAM-Prp-0113 EMJ03206 Prunus persica 38 3e-74 276
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 38 3e-62 237
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 39 5e-51 199
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 35 2e-45 181
WERAM-Glm-0090 GLYMA08G15870.1 Glycine max 38 5e-43 173
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 38 2e-30 131
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 35 3e-30 130
WERAM-Pot-0008 POPTR_0001s23640.1 Populus trichocarpa 31 5e-28 123
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 31 8e-27 119
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 36 2e-26 118
WERAM-Sot-0018 PGSC0003DMT400016153 Solanum tuberosum 30 2e-23 108
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 37 6e-21 100
WERAM-Aet-0108 EMT21081 Aegilops tauschii 39 6e-20 96.7
WERAM-Sem-0102 EFJ33930 Selaginella moellendorffii 41 4e-19 94.0
WERAM-Sei-0046 Si013408m Setaria italica 41 1e-16 85.9
WERAM-Amt-0004 ERN03421 Amborella trichopoda 30 1e-16 85.9
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 39 7e-16 83.2
WERAM-Hov-0028 MLOC_20426.3 Hordeum vulgare 38 2e-15 81.6
WERAM-Met-0045 AES66032 Medicago truncatula 51 6e-14 77.0
WERAM-Ors-0071 OS07T0565300-01 Oryza sativa 25 6e-13 73.6
WERAM-Orr-0081 ORUFI07G19680.1 Oryza rufipogon 25 1e-12 72.8
WERAM-Ori-0078 BGIOSGA024080-PA Oryza indica 25 1e-12 72.8
WERAM-Orni-0041 ONIVA04G17620.1 Oryza nivara 25 1e-12 72.4
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 52 6e-12 70.1
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 49 9e-12 69.7
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 49 9e-12 69.7
WERAM-Tra-0071 Traes_2BS_832F28506.1 Triticum aestivum 28 3e-09 60.8
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 34 6e-09 60.5
WERAM-Osl-0030 ABO97637 Ostreococcus lucimarinus 27 1e-08 59.3
WERAM-Cym-0015 CMK212CT Cyanidioschyzon merolae 35 1e-07 55.8
WERAM-Gaa-0069 ENSGACP00000009172.1 Gasterosteus aculeatus 29 2e-07 55.1
WERAM-Xim-0095 ENSXMAP00000008377.1 Xiphophorus maculatus 28 4e-07 53.9
WERAM-Chr-0030 EDP06193 Chlamydomonas reinhardtii 26 1e-06 52.8
WERAM-Spr-0015 CBQ70270 Sporisorium reilianum 31 1e-06 52.8
WERAM-Caa-0036 KGT63469 Candida albicans 30 6e-06 50.1
Created Date 25-Jun-2016