WERAM Information

Tag Content
WERAM ID WERAM-Art-0018
Ensembl Protein ID AT1G43770.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G43770 AT1G43770.1 AT1G43770.1
AT1G43770 AT1G43770.2 AT1G43770.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.40e-08 32.9 8 58
Organism Arabidopsis thaliana
Domain Profile
  Me_Reader PHD
      PHD.txt  2 tiClvCgkddegekemvqCdeCd.dwfHlkCvklplsslpegkswyCpsCke 52
                 ++C++Cg+ +++e  +v Cd+C  + +H +C++++  + +e   w+C+ C +
  AT1G43770.1  8 PVCQTCGDIGFEEA-LVFCDSCMfESIHRYCLGITPIPFTEYITWICEDCDN 58
                 58****99999987.********************666665578******86 PP
Protein Sequence
(Fasta)		MSLHVKGPVC QTCGDIGFEE ALVFCDSCMF ESIHRYCLGI TPIPFTEYIT WICEDCDNSE 60
SDSDCNEVDQ TVKKKKKSRN QPLVVLAEDN VLQEPLEGSK REESSCSRKP HELTCLDGNG 120
ESVLEAADSS SVPDHSSCTS KRKEVDQTAN LGHILERSEK KKKKKKKKKS INHSPPVLAV 180
EDHELQGTTN VVEPVEVSSS SPTKETMESK RQESSDSRKP HELTCLVGDS ETANSSSVPE 240
HNSCAVKKRK LSSGNKQIQL ADGSSSCRVA ESNMPLTLTS RNYRAQPIKI PIWRGLMSVK 300
GGNSCTMDGI VAHVSSLACP KVHETASSLK GRLSAEILPR LEVWPKTFLK NGGPKDESVA 360
LFFFPSSERC T 371
Nucleotide Sequence
(Fasta)		TTAACTTCTC TTCGTCTTCT TCTTCCTCCG ACCTTGGAAA ATCTCTCGTG ACTCGCTAGT 60
CTTCTCTAAT GTCTTTACAT GTCAAGGGAC CTGTTTGTCA AACTTGTGGC GACATAGGTT 120
TTGAAGAAGC ACTTGTCTTT TGTGACTCTT GTATGTTTGA GTCTATTCAC CGCTATTGCT 180
TAGGGATAAC ACCGATTCCT TTTACGGAAT ACATAACTTG GATTTGTGAG GATTGTGATA 240
ACAGTGAGAG TGATTCTGAT TGCAATGAAG TTGATCAGAC TGTTAAGAAG AAGAAGAAGA 300
GTAGAAATCA ACCCCTTGTG GTTTTAGCTG AGGACAATGT GCTCCAGGAA CCTTTGGAGG 360
GGTCTAAGAG AGAAGAAAGC TCATGTAGCA GAAAACCTCA TGAATTGACT TGTTTAGATG 420
GAAATGGAGA ATCTGTTTTG GAGGCTGCAG ATTCATCTAG TGTGCCAGAT CATAGTTCTT 480
GTACTAGCAA AAGGAAAGAA GTTGATCAGA CTGCTAATCT TGGACATATC TTGGAGAGGA 540
GTGAGAAAAA GAAGAAGAAG AAGAAGAAGA AAAAGAGCAT CAATCATTCG CCACCGGTTT 600
TAGCTGTTGA GGACCATGAG CTTCAGGGTA CTACCAATGT TGTTGAACCT GTGGAGGTGT 660
CTTCTTCTTC ACCAACTAAA GAAACGATGG AGTCTAAGAG ACAAGAAAGC TCAGATAGTA 720
GAAAACCTCA TGAATTGACT TGTTTAGTTG GAGATTCGGA GACCGCTAAT TCATCTAGTG 780
TGCCAGAGCA TAATTCTTGT GCTGTCAAAA AGAGAAAATT AAGTTCTGGA AACAAACAGA 840
TTCAGTTAGC TGATGGGAGT AGTTCTTGCA GAGTGGCTGA ATCAAATATG CCTCTAACGT 900
TGACATCTAG GAACTATAGA GCACAACCTA TCAAAATACC GATATGGAGG GGATTGATGT 960
CTGTTAAAGG AGGAAACAGC TGTACCATGG ATGGGATTGT TGCTCATGTA TCAAGCTTAG 1020
CCTGCCCTAA AGTCCATGAA ACGGCTAGTT CATTAAAGGG TCGGCTCTCT GCTGAAATAC 1080
TTCCTAGGTT GGAAGTATGG CCAAAGACCT TTTTGAAGAA TGGAGGACCT AAGGATGAAA 1140
GCGTTGCCCT TTTTTTCTTC CCTTCCAGTG AAAGGTGTAC ATGAAACAGT GATTTGTTTT 1200
TCTCTCCCTA TGCTTATGTT GTAAAAGTAT CTGACCATTT TTGTGTTTGG TTTCCAGTAA 1260
TGATGAAAAG GTTTTTGATT CCCTTGTTGA TAAAATGAAG AAGAATGATT CTGCGATGAG 1320
ATGTGTGCTT AATGATGCAG AACTTCTACT CTTCACATCT TATATGTTAC CAAAGGATTC 1380
TTGGACTTTT AACTCAAAGT ACTACCTGTG GGGCGTCTTC AAGCCTAGAC AGACTTCTCG 1440
ATATTAGCCA CTCCAAGACT CGCTACCTTT AACAGTCTCT AACTTCGAGC AAGGTTTAAC 1500
AGACAGATGG AAATCATAAG TAGGACTTAA AGTATTCTCC TTCATCCTTT TTGAGTATAT 1560
GTTAGTTCTT TTTCGGATTT AACGCATAGA TGGGTTTGGT TGTCCGATTG TTGATAGTTA 1620
GCCAGATGCT GTATAGAATC GGAACCGAGA TGGCATCCTT GATAGCATAT CTTTGTCTTT 1680
TGAGGCTTTT TTTGGTGGAT TTGTGCCACT GGTTAGTCAA ATGAATGTTA ACTTTGAAAT 1740
C 1742
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0003 Al_scaffold_0001_3838 Arabidopsis lyrata 75 1e-137 486
WERAM-Orgl-0112 OGLUM11G09590.1 Oryza glumaepatula 30 2e-08 57.8
WERAM-Org-0109 ORGLA11G0088700.1 Oryza glaberrima 41 3e-08 57.0
WERAM-Ori-0035 BGIOSGA011620-PA Oryza indica 42 6e-08 55.8
WERAM-Lep-0117 LPERR12G08750.1 Leersia perrieri 40 6e-08 55.8
WERAM-Orbr-0124 OB12G19130.1 Oryza brachyantha 38 7e-08 55.8
WERAM-Orm-0101 OMERI11G08750.1 Oryza meridionalis 42 7e-08 55.8
WERAM-Sei-0079 Si021317m Setaria italica 35 1e-07 54.7
WERAM-Orr-0117 ORUFI11G10640.1 Oryza rufipogon 46 2e-07 53.9
WERAM-Orb-0116 OBART11G10010.1 Oryza barthii 46 2e-07 53.9
WERAM-Orni-0116 ONIVA11G10100.1 Oryza nivara 46 3e-07 53.9
WERAM-Orl-0086 KN539942.1_FGP002 Oryza longistaminata 31 4e-07 53.1
Created Date 25-Jun-2016