WERAM Information

Tag Content
WERAM ID WERAM-Art-0003
Ensembl Protein ID AT1G04050.1
Uniprot Accession Q946J2; SUVR1_ARATH; O64498; Q9SAW1
Genbank Protein ID NP_171901.3
Protein Name Probable inactive histone-lysine N-methyltransferase SUVR1
Genbank Nucleotide ID NM_100286.3
Gene Name SUVR1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G04050 AT1G04050.1 AT1G04050.1
Details
Type Family Domain Substrates AA References (PMIDs)
HMT SUV39 SET H3K9 K 20703330
Status Reviewed
Classification
Type Family E-value Score Start End
HMT SUV39 7.50e-34 117.7 82 696
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)		 Probable inactive histone-lysine methyltransferase that acts as regulator of transctiptional gene silencing independently of histone H3K9 methylation. Contributes to transcriptional gene silencing at RNA-directed DNA methylation (RdDM) target loci but also at RdDM-independent target loci.
Domain Profile
  HMT SUV39
    SUV39.txt 70 s 70
                 +
  AT1G04050.1 82 R 82
                 1 PP
    SUV39.txt   2 rLqvfktenk.GwGvrclddiakgsFvciyaGeiltddeaekegleegdeyladldskesvenlkegyesdvplssdssntrqekdkeeseyiidakk 98 
                  +Lqvf t n  GwG+r+l++++kg+F+c+y+Geilt  e  +++ e++ +  + ld+++ +                     +e  + ++ +++d   
  AT1G04050.1 567 KLQVFFTPNGkGWGLRTLEKLPKGAFICEYIGEILTIPELYQRSFEDKPTLPVILDAHWGS---------------------EERLEGDKALCLDGMF 643
                  8*******977********************************99*999999999997664.....................445567789******* PP
    SUV39.txt  99 egnvgrflnHsc.spNlfvqnvfvdthdlrfprvafFaskrikagtELtwdYg 150
                  +gn++rflnH+c ++Nl+  +v v+t d++++++afF++++i+a++EL+wdYg
  AT1G04050.1 644 YGNISRFLNHRClDANLIEIPVQVETPDQHYYHLAFFTTRDIEAMEELAWDYG 696
                  ****************************************************6 PP
Protein Sequence
(Fasta)		MAPNLRIKKA CDAMKLLGIS ETKTRAFLRK LLKTYENNWD FIEEDAYKVL LDAIFDEADA 60
QSTEKNKKEE EKKKKEEEKK SRSVATSRGR RKAPEPLVQD EEDDMDEDEF PLKRRLRSRR 120
GRASSSSSSS SSYNNEDLKT QPEEEDEDDG VTELPPLKRY VRRNGERGLA MTVYNNASPS 180
SSSRLSMEPE EVPPMVLLPA HPMETKVSEA SALVILNDEP NIDHKPVISD TGNCSAPMLE 240
MGKSNIHVQE WDWETKDILN DTTAMDVSPS SAIGESSEHK VAAASVELAS STSGEAKICL 300
SFAPATGETT NLHLPSMEDL RRAMEEKCLK SYKIVHPEFS VLGFMKDMCS CYIDLAKNST 360
SQLLETETVC DMSKAGDESG AVGISMPLVV VPECEISGDG WKAISNMKDI TAGEENVEIP 420
WVNEINEKVP SRFRYMPHSF VFQDAPVIFS LSSFSDEQSC STSCIEDCLA SEMSCNCAIG 480
VDNGFAYTLD GLLKEEFLEA RISEARDQRK QVLRFCEECP LERAKKVEIL EPCKGHLKRG 540
AIKECWFKCG CTKRCGNRVV QRGMHNKLQV FFTPNGKGWG LRTLEKLPKG AFICEYIGEI 600
LTIPELYQRS FEDKPTLPVI LDAHWGSEER LEGDKALCLD GMFYGNISRF LNHRCLDANL 660
IEIPVQVETP DQHYYHLAFF TTRDIEAMEE LAWDYGIDFN DNDSLMKPFD CLCGSRFCRN 720
KKRSTKTMQI LNKA 734
Nucleotide Sequence
(Fasta)		AAGATGAAAG TTTCCACTTT TGTTACTTTG CTATGTTTAT TTCTGAAGTT TTTTGAGGTT 60
GGTGAGTGAT TCAGCTTTGT TATTGCAGAA ACTTGTTGAA AATGGCACCG AATCTTAGGA 120
TTAAGAAAGC CTGTGACGCG ATGAAGCTTT TAGGAATATC AGAGACGAAA ACAAGGGCCT 180
TTCTCAGGAA ACTTCTCAAG ACCTATGAGA ATAACTGGGA TTTCATTGAA GAGGATGCTT 240
ATAAGGTCCT TCTTGATGCA ATCTTCGACG AGGCTGATGC CCAGTCCACT GAAAAAAATA 300
AGAAGGAAGA GGAAAAGAAG AAGAAGGAAG AGGAAAAGAA GTCCAGAAGT GTAGCAACGA 360
GCAGGGGAAG GAGGAAAGCT CCTGAGCCTT TGGTACAAGA TGAAGAGGAC GATATGGATG 420
AAGATGAATT TCCATTGAAA AGGAGGTTGC GCAGTAGACG TGGAAGAGCT TCATCTTCAT 480
CTTCATCTTC ATCTTCCTAT AACAACGAGG ATCTCAAGAC ACAGCCTGAA GAGGAAGATG 540
AAGATGATGG TGTGACTGAA TTACCTCCGT TAAAGAGGTA CGTACGCAGA AATGGTGAAC 600
GAGGGTTGGC AATGACTGTT TATAACAATG CAAGTCCTAG CTCCAGCAGT CGCTTGTCAA 660
TGGAGCCCGA AGAAGTACCA CCAATGGTTC TATTGCCAGC TCATCCTATG GAAACGAAGG 720
TTTCTGAAGC CAGTGCACTT GTTATCCTCA ATGATGAACC CAATATCGAT CATAAGCCTG 780
TGATTTCAGA TACAGGAAAC TGTTCAGCTC CCATGCTTGA GATGGGGAAA TCAAATATAC 840
ATGTGCAAGA ATGGGATTGG GAAACCAAAG ATATTCTCAA TGATACTACT GCCATGGATG 900
TGTCTCCTTC TTCAGCTATT GGGGAATCAA GTGAGCATAA GGTTGCTGCT GCTTCAGTTG 960
AATTAGCTTC TTCGACTTCT GGTGAGGCAA AGATTTGTCT AAGTTTCGCG CCTGCAACTG 1020
GAGAAACAAC GAATTTGCAT TTGCCTTCTA TGGAGGATCT TCGGAGAGCA ATGGAGGAGA 1080
AGTGCCTCAA GTCGTACAAA ATTGTTCACC CCGAGTTTTC GGTCCTTGGG TTCATGAAGG 1140
ACATGTGTAG CTGTTACATA GACTTGGCAA AGAATTCAAC CAGCCAGTTG CTTGAAACAG 1200
AAACCGTATG TGACATGAGT AAGGCGGGTG ATGAAAGTGG TGCAGTTGGC ATTTCGATGC 1260
CGTTGGTGGT TGTTCCTGAA TGCGAGATCT CGGGAGATGG CTGGAAAGCA ATTAGCAACA 1320
TGAAGGACAT TACGGCTGGT GAAGAAAACG TTGAGATTCC ATGGGTGAAT GAGATCAACG 1380
AGAAGGTTCC TTCCCGTTTC CGTTACATGC CTCACAGCTT TGTGTTTCAA GATGCTCCAG 1440
TGATATTCTC GCTCTCAAGT TTCTCTGATG AGCAAAGCTG CTCCACTTCT TGTATCGAAG 1500
ACTGCCTGGC TTCAGAAATG TCGTGCAATT GTGCAATTGG TGTTGATAAC GGGTTTGCGT 1560
ACACATTAGA TGGGTTACTC AAAGAAGAAT TCTTGGAAGC TCGGATCTCT GAGGCTCGTG 1620
ATCAACGGAA ACAGGTGCTG CGATTCTGTG AAGAGTGCCC ATTGGAGAGA GCTAAAAAGG 1680
TTGAGATTTT GGAACCATGT AAAGGGCATC TAAAGAGGGG AGCCATTAAA GAGTGTTGGT 1740
TCAAATGTGG TTGCACTAAG AGATGCGGTA ACCGAGTGGT GCAAAGAGGA ATGCACAACA 1800
AATTACAGGT GTTTTTCACG CCAAATGGGA AAGGCTGGGG ACTTAGGACT TTAGAGAAAC 1860
TGCCTAAAGG GGCATTTATT TGTGAGTACA TTGGAGAGAT ATTGACAATT CCGGAGTTAT 1920
ACCAACGTAG CTTTGAAGAT AAACCCACTT TGCCTGTGAT ATTGGATGCA CATTGGGGTT 1980
CTGAAGAAAG GTTAGAGGGT GACAAAGCTC TGTGTCTTGA TGGGATGTTT TATGGAAATA 2040
TCTCAAGGTT CCTTAACCAC AGATGTCTTG ATGCAAACTT GATCGAGATT CCAGTTCAAG 2100
TCGAGACTCC GGATCAGCAT TATTATCATC TTGCATTCTT CACAACAAGA GACATCGAGG 2160
CAATGGAGGA ACTCGCATGG GATTATGGCA TTGACTTCAA CGATAATGAC TCTCTAATGA 2220
AACCCTTTGA TTGTCTGTGT GGTAGCAGAT TCTGCAGGAA CAAGAAGCGA TCAACGAAGA 2280
CCATGCAGAT TTTGAACAAA GCATGAGAGG CTAGTGAAGA AGAAAAGACG TGATGAGACC 2340
CTCTGTTTTT TGGTGAATGG GACTCTCCAA ACCGGTCCGG GTTAATAGAT TTTGTAGGTT 2400
GGGAAAAAAA GAAGCTTAAG TTGGGTATTG TGTGATCAAA CTCTGTATAG CTCGAGGGTC 2460
CAGTGCCTTT TGTTTTAATT TAGAAGTTTG ACCATCTTTA ATTCTAAATC TCTCTAAACC 2520
ACGTTCTTTT TTGTAGTAAA CCATAAATTT CCGCACTGTT GAGGGCCAAC GGATCCCTGA 2580
TCGTAAGACT AGGAGTCTAG GATGGACAAG TTTTTACTTC TTACTTTTAT CACTCAGTTT 2640
ATGGAGATGG AAAGTATGAT TGTATTGTCT TTGTG 2676
Sequence Source Ensembl
Keyword

KW-0156--Chromatin regulator
KW-0158--Chromosome
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0489--Methyltransferase
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0943--RNA-mediated gene silencing
KW-0949--S-adenosyl-L-methionine
KW-0808--Transferase
KW-0862--Zinc
--
Interpro

IPR007728--Pre-SET_dom
IPR001214--SET_dom
IPR025776--SUVR4/1/2
IPR018848--WIYLD_domain
PROSITE

PS50867--PRE_SET
PS51580--SAM_MT43_3
PS50280--SET
Pfam

PF05033--Pre-SET
PF00856--SET
PF10440--WIYLD
Gene Ontology

GO:0005694--C:chromosome
GO:0005730--C:nucleolus
GO:0018024--F:histone-lysine N-methyltransferase activity
GO:0008270--F:zinc ion binding
GO:0031047--P:gene silencing by RNA
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0046 fgenesh2_kg.1__ 337__ AT1G04050.1 Arabidopsis lyrata 85 0.0 1134
WERAM-Bro-0126 Bo7g066910.1 Brassica oleracea 46 6e-174 608
WERAM-Brr-0182 Bra036004.1-P Brassica rapa 60 4e-165 579
WERAM-Pot-0034 POPTR_0002s25920.1 Populus trichocarpa 47 7e-137 485
WERAM-Thc-0012 EOX94337 Theobroma cacao 50 3e-135 479
WERAM-Prp-0034 EMJ00908 Prunus persica 42 2e-125 447
WERAM-Mua-0037 GSMUA_Achr1P20340_001 Musa acuminata 44 1e-124 444
WERAM-Viv-0044 VIT_07s0005g04190.t01 Vitis vinifera 57 2e-118 423
WERAM-Orb-0026 OBART02G24430.1 Oryza barthii 45 5e-117 419
WERAM-Orni-0102 ONIVA09G12590.1 Oryza nivara 45 7e-117 419
WERAM-Orr-0025 ORUFI02G25800.1 Oryza rufipogon 45 8e-117 418
WERAM-Ors-0024 OS02T0621100-01 Oryza sativa 45 1e-116 418
WERAM-Ori-0027 BGIOSGA008642-PA Oryza indica 45 1e-116 417
WERAM-Org-0027 ORGLA02G0211700.1 Oryza glaberrima 45 2e-116 417
WERAM-Sol-0086 Solyc06g083760.2.1 Solanum lycopersicum 57 1e-115 414
WERAM-Sei-0074 Si019326m Setaria italica 42 4e-115 413
WERAM-Glm-0115 GLYMA10G30833.1 Glycine max 41 1e-114 411
WERAM-Sot-0059 PGSC0003DMT400051920 Solanum tuberosum 57 2e-114 410
WERAM-Lep-0050 LPERR04G26410.1 Leersia perrieri 46 5e-114 409
WERAM-Brd-0035 BRADI1G64870.1 Brachypodium distachyon 44 5e-113 405
WERAM-Orbr-0059 OB04G37970.1 Oryza brachyantha 39 6e-113 405
WERAM-Aet-0081 EMT14309 Aegilops tauschii 42 6e-112 402
WERAM-Orm-0028 OMERI02G23960.1 Oryza meridionalis 43 2e-111 400
WERAM-Tru-0055 TRIUR3_22796-P1 Triticum urartu 43 9e-111 398
WERAM-Tra-0082 Traes_2DL_651A6EFC9.1 Triticum aestivum 43 1e-110 398
WERAM-Orl-0074 KN539582.1_FGP009 Oryza longistaminata 43 1e-110 398
WERAM-Orgl-0048 OGLUM04G30830.1 Oryza glumaepatula 43 1e-110 397
WERAM-Amt-0047 ERN15944 Amborella trichopoda 44 5e-110 396
WERAM-Zem-0030 GRMZM2G042442_P01 Zea mays 46 1e-109 394
WERAM-Met-0022 KEH42476 Medicago truncatula 54 9e-108 388
WERAM-Sob-0108 Sb07g023480.1 Sorghum bicolor 43 1e-107 388
WERAM-Hov-0084 MLOC_63852.1 Hordeum vulgare 43 3e-106 383
WERAM-Orp-0047 OPUNC04G28530.1 Oryza punctata 43 6e-101 366
WERAM-Php-0112 PP1S523_9V6.1 Physcomitrella patens 49 1e-88 325
WERAM-Sem-0006 EFJ20940 Selaginella moellendorffii 46 1e-76 285
WERAM-Tar-0120 ENSTRUP00000025101.1 Takifugu rubripes 33 5e-36 150
WERAM-Ten-0062 ENSTNIP00000007887.1 Tetraodon nigroviridis 33 9e-36 149
WERAM-Sah-0144 ENSSHAP00000015022.1 Sarcophilus harrisii 34 1e-35 149
WERAM-Orn-0153 ENSONIP00000016204.1 Oreochromis niloticus 33 2e-35 148
WERAM-Mod-0151 ENSMODP00000021357.3 Monodelphis domestica 34 3e-35 148
WERAM-Myl-0132 ENSMLUP00000010608.2 Myotis lucifugus 33 3e-35 147
WERAM-Fec-0013 ENSFCAP00000001127.3 Felis catus 34 4e-35 147
WERAM-Anc-0130 ENSACAP00000012109.2 Anolis carolinensis 34 6e-35 146
WERAM-Pof-0219 ENSPFOP00000017761.1 Poecilia formosa 33 7e-35 146
WERAM-Leo-0011 ENSLOCP00000001939.1 Lepisosteus oculatus 32 7e-35 146
WERAM-Caf-0200 ENSCAFP00000028661.3 Canis familiaris 33 1e-34 145
WERAM-Aim-0180 ENSAMEP00000017039.1 Ailuropoda melanoleuca 33 1e-34 145
WERAM-Mup-0174 ENSMPUP00000015170.1 Mustela putorius furo 33 1e-34 145
WERAM-Dan-0115 ENSDNOP00000014629.3 Dasypus novemcinctus 32 1e-34 145
WERAM-Orla-0146 ENSORLP00000017297.1 Oryzias latipes 33 2e-34 145
WERAM-Gaga-0086 ENSGALP00000013792.4 Gallus gallus 33 2e-34 145
WERAM-Gaa-0188 ENSGACP00000023866.1 Gasterosteus aculeatus 32 2e-34 145
WERAM-Otg-0003 ENSOGAP00000000118.2 Otolemur garnettii 32 2e-34 144
WERAM-Fia-0077 ENSFALP00000005785.1 Ficedula albicollis 33 3e-34 144
WERAM-Tag-0044 ENSTGUP00000002934.1 Taeniopygia guttata 32 3e-34 144
WERAM-Meg-0025 ENSMGAP00000001979.2 Meleagris gallopavo 34 3e-34 144
WERAM-Hos-0211 ENSP00000417980.1 Homo sapiens 33 3e-34 144
WERAM-Xim-0080 ENSXMAP00000007374.1 Xiphophorus maculatus 33 3e-34 144
WERAM-Orc-0169 ENSOCUP00000015109.3 Oryctolagus cuniculus 33 4e-34 144
WERAM-Tut-0155 ENSTTRP00000013127.1 Tursiops truncatus 33 6e-34 143
WERAM-Chs-0200 ENSCSAP00000012911.1 Chlorocebus sabaeus 33 6e-34 143
WERAM-Poa-0190 ENSPPYP00000022240.1 Pongo abelii 32 7e-34 143
WERAM-Gog-0050 ENSGGOP00000004530.2 Gorilla gorilla 32 7e-34 143
WERAM-Paa-0220 ENSPANP00000017447.1 Papio anubis 32 8e-34 143
WERAM-Pat-0181 ENSPTRP00000048599.4 Pan troglodytes 32 9e-34 142
WERAM-Dar-0065 ENSDARP00000110328.2 Danio rerio 33 1e-33 142
WERAM-Bot-0117 ENSBTAP00000016118.5 Bos taurus 32 1e-33 142
WERAM-Mam-0180 ENSMMUP00000025757.2 Macaca mulatta 33 1e-33 142
WERAM-Lac-0126 ENSLACP00000014864.1 Latimeria chalumnae 34 2e-33 142
WERAM-Cap-0085 ENSCPOP00000006136.2 Cavia porcellus 33 2e-33 142
WERAM-Pes-0039 ENSPSIP00000006137.1 Pelodiscus sinensis 33 2e-33 141
WERAM-Ova-0026 ENSOARP00000003659.1 Ovis aries 33 2e-33 141
WERAM-Cis-0009 ENSCSAVP00000000984.1 Ciona savignyi 35 3e-33 141
WERAM-Mum-0143 ENSMUSP00000119057.2 Mus musculus 32 3e-33 141
WERAM-Dio-0152 ENSDORP00000013968.1 Dipodomys ordii 31 4e-33 140
WERAM-Loa-0112 ENSLAFP00000009820.3 Loxodonta africana 32 4e-33 140
WERAM-Ict-0151 ENSSTOP00000016647.1 Ictidomys tridecemlineatus 34 5e-33 140
WERAM-Caj-0240 ENSCJAP00000004503.2 Callithrix jacchus 33 5e-33 140
WERAM-Mim-0034 ENSMICP00000003271.1 Microcebus murinus 34 5e-33 140
WERAM-Sus-0015 ENSSSCP00000001517.1 Sus scrofa 33 5e-33 140
WERAM-Ran-0046 ENSRNOP00000063511.3 Rattus norvegicus 32 5e-33 140
WERAM-Ocp-0041 ENSOPRP00000003534.2 Ochotona princeps 33 7e-33 140
WERAM-Ptv-0045 ENSPVAP00000004855.1 Pteropus vampyrus 33 7e-33 140
WERAM-Eqc-0010 ENSECAP00000003787.1 Equus caballus 33 8e-33 139
WERAM-Gam-0065 ENSGMOP00000006394.1 Gadus morhua 32 9e-33 139
WERAM-Xet-0075 ENSXETP00000023873.2 Xenopus tropicalis 33 1e-32 139
WERAM-Nol-0099 ENSNLEP00000011297.1 Nomascus leucogenys 32 1e-32 139
WERAM-Cii-0064 ENSCINP00000028043.2 Ciona intestinalis 43 1e-31 135
WERAM-Ora-0089 ENSOANP00000015800.2 Ornithorhynchus anatinus 33 1e-30 132
WERAM-Anp-0102 ENSAPLP00000012074.1 Anas platyrhynchos 33 4e-29 127
Created Date 25-Jun-2016